RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SCYL1Q96KG9 808 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 ETF1P62495 437 aaKnown RBP26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 FAM178BQ8IXR5 827 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 SNX1Q13596 522 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 LRRC43Q8N309 656 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 SUGCTQ9HAC7 445 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 POLR2MP0CAP2 368 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 KLHL14Q9P2G3 628 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 CCT5P48643 541 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 IGBP1P78318 339 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 CERKLQ49MI3 558 aaPredicted RBP26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 VCXQ9H320 206 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 DIXDC1Q155Q3 683 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 ARMCX5Q6P1M9 558 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 SPICE1Q8N0Z3 855 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 PCDHA5Q9Y5H7 936 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 ZNF853P0CG23 659 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 MESDQ14696 234 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 GSDMBQ8TAX9 411 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 RTEL1Q9NZ71 1219 aa26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 MAGED2Q9UNF1 606 aaPredicted RBP26.22■■□□□ 1.79
RAPGEF1-203ENST00000372195 MRFAP1L1Q96HT8 127 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 DBNLQ9UJU6 430 aaKnown RBP26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 POC1B-GALNT4F8VUJ3 575 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 CLTAP09496 248 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 KCTD1Q719H9 257 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 PLA2G4DQ86XP0 818 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 IFNAR2P48551 515 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 FBXO11Q86XK2 927 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 CERS3Q8IU89 383 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 RIC8AQ9NPQ8 531 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 P3H4Q92791 437 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 RPGRIP1Q96KN7 1286 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 ATF2P15336 505 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 PIK3CAP42336 1068 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 TRIM50Q86XT4 487 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 C1orf112Q9NSG2 853 aa26.21■■□□□ 1.79
RAPGEF1-203ENST00000372195 SOWAHDA6NJG2 315 aa26.2■■□□□ 1.79
RAPGEF1-203ENST00000372195 SLFN12Q8IYM2 578 aa26.2■■□□□ 1.79
RAPGEF1-203ENST00000372195 CDC25AP30304 524 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 ACRBPQ8NEB7 543 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 DDX27Q96GQ7 796 aaKnown RBP26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 PLEKHF1Q96S99 279 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 TUBGCP2Q9BSJ2 902 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 TMEM232C9JQI7 657 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 NIM1KQ8IY84 436 aa26.2■■□□□ 1.78
RAPGEF1-203ENST00000372195 BRDTQ58F21 947 aaPredicted RBP26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 ATP2A3Q93084 1043 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 LARGE1O95461 756 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 SPOUT1Q5T280 376 aaKnown RBP26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 GRK7Q8WTQ7 553 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 PPP2R5AQ15172 486 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 EAPPQ56P03 285 aaPredicted RBP26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 PPP4R1Q8TF05 950 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 PHBP35232 272 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 DCLK2Q8N568 766 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 PRKAB2O43741 272 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 OPHN1O60890 802 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 MOCS3O95396 460 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 GBP5Q96PP8 586 aa26.19■■□□□ 1.78
RAPGEF1-203ENST00000372195 MYL7Q01449 175 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 PI16Q6UXB8 463 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 SRGAP1Q7Z6B7 1085 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 MAN1B1Q9UKM7 699 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 CYP21A2P08686 494 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 P4HA1P13674 534 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 GCKP35557 465 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 NME8Q8N427 588 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 MAP4K1Q92918 833 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 RAB3IPQ96QF0 476 aaPredicted RBP26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 TEKT3Q9BXF9 490 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 CLIC2O15247 247 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 RPSAP08865 295 aaKnown RBP26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 SLC16A2P36021 539 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 PABPC4Q13310 644 aaKnown RBP eCLIP26.18■■□□□ 1.782e-7■■■■■ 32.7
RAPGEF1-203ENST00000372195 MEIS1O00470 390 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 DDAH1O94760 285 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 EXOC3L4Q17RC7 722 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.18■■□□□ 1.782e-6■□□□□ 9
RAPGEF1-203ENST00000372195 PLXNC1O60486 1568 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 ERVV-2B6SEH9 535 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 PEX19P40855 299 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 TBC1D22AQ8WUA7 517 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 TPX2Q9ULW0 747 aaKnown RBP26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 MAD1L1Q9Y6D9 718 aa26.18■■□□□ 1.78
RAPGEF1-203ENST00000372195 CUL4BQ13620 913 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 ZNF148Q9UQR1 794 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 M0QZ92 97 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 CHURC1Q8WUH1 139 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 CDCA7Q9BWT1 371 aaPredicted RBP26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 LRRIQ4A6NIV6 560 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 CAPN9O14815 690 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 RPS6KA2Q15349 733 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 FAM26FQ5R3K3 315 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 PCIF1Q9H4Z3 704 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 TRIML1Q8N9V2 468 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 NSUN7Q8NE18 718 aaKnown RBP26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 HAUS4Q9H6D7 363 aa26.17■■□□□ 1.78
RAPGEF1-203ENST00000372195 FMNL1O95466 1100 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms