RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 STAG2Q8N3U4 1231 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 SYNPOQ8N3V7 929 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 NEK9Q8TD19 979 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 NINJ1Q92982 152 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 CHFRQ96EP1 664 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 SUCLG2Q96I99 432 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 DMRTB1Q96MA1 342 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 GPR101Q96P66 508 aaPredicted RBP4.56□□□□□ -1.68
MCF2-203ENST00000370576 TRMT1Q9NXH9 659 aaKnown RBP4.56□□□□□ -1.68
MCF2-203ENST00000370576 HDAC9Q9UKV0 1011 aa4.56□□□□□ -1.68
MCF2-203ENST00000370576 PTPRFP10586 1907 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 LCTP09848 1927 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 LOXHD1Q8IVV2 1947 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 J3KRW8 73 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 CAPN15O75808 1086 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 FMNL1O95466 1100 aaPredicted RBP4.55□□□□□ -1.68
MCF2-203ENST00000370576 NBPF7P0C2Y1 421 aaPredicted RBP4.55□□□□□ -1.68
MCF2-203ENST00000370576 ATP5JP18859 108 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 PDE1AP54750 535 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 UBXN2AP68543 259 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 GABREP78334 506 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 CTAG1AP78358 180 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 EPHA10Q5JZY3 1008 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 BRICD5Q6PL45 260 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 C1orf74Q96LT6 269 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 USP26Q9BXU7 913 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
MCF2-203ENST00000370576 DHX36Q9H2U1 1008 aaKnown RBP4.55□□□□□ -1.68
MCF2-203ENST00000370576 GIMAP2Q9UG22 337 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 TBK1Q9UHD2 729 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 PLAAQ9Y263 795 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 SLC30A1Q9Y6M5 507 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 ABHD14A-ACY1A0A1B0GW23 586 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 INMTO95050 263 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 SLC5A1P13866 664 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 MLC1Q15049 377 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 LHFPL2Q6ZUX7 228 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 NECAB2Q7Z6G3 386 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 HVCN1Q96D96 273 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 TM6SF1Q9BZW5 370 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 PRDM11Q9NQV5 511 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 BLOC1S4Q9NUP1 217 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 RABGAP1Q9Y3P9 1069 aa4.55□□□□□ -1.68
MCF2-203ENST00000370576 GZMAP12544 262 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 RAD52P43351 418 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 RPIAP49247 311 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 RENBPP51606 427 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 NCOA4Q13772 614 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ZNF449Q6P9G9 518 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 STRA8Q7Z7C7 330 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 NLRP10Q86W26 655 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ERC1Q8IUD2 1116 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ELOA2Q8IYF1 753 aaPredicted RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 GJD3Q8N144 294 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 STON2Q8WXE9 905 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 DDX12PQ92771 950 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 SHDQ96IW2 340 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 PI4K2AQ9BTU6 479 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 TMEM121BQ9BXQ6 578 aaPredicted RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 TNKS2Q9H2K2 1166 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 TSPY26PQ9H489 355 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 V9GY48 417 aaPredicted RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 ITIH6Q6UXX5 1313 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 COL4A5P29400 1685 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ZNF236Q9UL36 1845 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 MASP2O00187 686 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ECEL1O95672 775 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 DNAJB2P25686 324 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 C11orf91Q3C1V1 193 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 FAM26DQ5JW98 314 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 NUTM2GQ5VZR2 741 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 CEP68Q76N32 757 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 TMEM151BQ8IW70 566 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ELAC2Q9BQ52 826 aaKnown RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 MAP3K2Q9Y2U5 619 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 TCRBV5S4A2TA0A5A2 114 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 K7ESF4 209 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 SEC24BO95487 1268 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 KRT1P04264 644 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 FBXO45P0C2W1 286 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ATF7P17544 494 aaPredicted RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 TGFB2P61812 414 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 MPP1Q00013 466 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 PLCB3Q01970 1234 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 KIF22Q14807 665 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 KCNV1Q6PIU1 500 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 DBX2Q6ZNG2 339 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 LINC00116Q8NCU8 138 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 THAP11Q96EK4 314 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 PPM1MQ96MI6 270 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 LSG1Q9H089 658 aaKnown RBP4.54□□□□□ -1.68
MCF2-203ENST00000370576 PLCB1Q9NQ66 1216 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 CYLDQ9NQC7 956 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 FNIP2Q9P278 1114 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 VTI1BQ9UEU0 232 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 ZSWIM8A7E2V4 1837 aa4.54□□□□□ -1.68
MCF2-203ENST00000370576 PI4KAP2A4QPH2 592 aa4.53□□□□□ -1.68
MCF2-203ENST00000370576 APBB3O95704 486 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms