RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 GSDMAQ96QA5 445 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 PLA2R1Q13018 1463 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 KCNK3O14649 394 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 POLGP54098 1239 aaPredicted RBP21.61■■□□□ 1.05
LMO4-202ENST00000370544 PPP2R5DQ14738 602 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 BUB1O43683 1085 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 NSMCE1Q8WV22 266 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 LARP4BQ92615 738 aaKnown RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 FEZ2Q9UHY8 353 aaPredicted RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 COPB1P53618 953 aaKnown RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 FAM182BQ5T319 152 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 LRCH2Q5VUJ6 765 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 SIRT2Q8IXJ6 389 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 SUGCTQ9HAC7 445 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 PCDHA5Q9Y5H7 936 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 CIB2O75838 187 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 HSPA1LP34931 641 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 KIF23Q02241 960 aaPredicted RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 HHATQ5VTY9 493 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 PLEKHA4Q9H4M7 779 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 DLATP10515 647 aaKnown RBP21.6■■□□□ 1.05
LMO4-202ENST00000370544 LGSNQ5TDP6 509 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 RAB20Q9NX57 234 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
LMO4-202ENST00000370544 CD2BP2O95400 341 aaKnown RBP21.59■■□□□ 1.05
LMO4-202ENST00000370544 TTC31Q49AM3 519 aaPredicted RBP21.59■■□□□ 1.05
LMO4-202ENST00000370544 CASC4Q6P4E1 433 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 CNOT6LQ96LI5 555 aaKnown RBP21.59■■□□□ 1.05
LMO4-202ENST00000370544 AK8Q96MA6 479 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 NRBP2Q9NSY0 501 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 SASH1O94885 1247 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 hCG_1984214I3L0E3 225 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 MMP1P03956 469 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 DENND2CQ68D51 928 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 ZNF713Q8N859 430 aaPredicted RBP21.59■■□□□ 1.05
LMO4-202ENST00000370544 PPFIA1Q13136 1202 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 FAM160B1Q5W0V3 765 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 CCDC110Q8TBZ0 833 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 ADPGKQ9BRR6 497 aa21.59■■□□□ 1.05
LMO4-202ENST00000370544 DDX41Q9UJV9 622 aaKnown RBP21.59■■□□□ 1.05
LMO4-202ENST00000370544 GJA10Q969M2 543 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 TBC1D31Q96DN5 1066 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 PIGSQ96S52 555 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 TBC1D8O95759 1140 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
LMO4-202ENST00000370544 HAUS4Q9H6D7 363 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 VPS37BQ9H9H4 285 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 KANSL2Q9H9L4 492 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.58■■□□□ 1.05
LMO4-202ENST00000370544 STAM2O75886 525 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 GDF11O95390 407 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 KRT15P19012 456 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 CUL4AQ13619 759 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 GPR162Q16538 588 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 FAM47CQ5HY64 1035 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 ODR4Q5SWX8 454 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 DDX23Q9BUQ8 820 aaKnown RBP21.58■■□□□ 1.05
LMO4-202ENST00000370544 PIH1D3Q9NQM4 214 aaKnown RBP21.58■■□□□ 1.05
LMO4-202ENST00000370544 SERPINB13Q9UIV8 391 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 ABCC12Q96J65 1359 aa21.58■■□□□ 1.05
LMO4-202ENST00000370544 PPM1KQ8N3J5 372 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 STMN2Q93045 179 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 CCDC127Q96BQ5 260 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 LRRIQ4A6NIV6 560 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 KRIT1O00522 736 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 NCAPD2Q15021 1401 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 SUSD4Q5VX71 490 aa21.58■■□□□ 1.04
LMO4-202ENST00000370544 CC2D2BQ6DHV5 1058 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 VPS52Q8N1B4 723 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 ZNF577Q9BSK1 485 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 SLC16A2P36021 539 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 UBXN2AP68543 259 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 RSAD2Q8WXG1 361 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 MMS19Q96T76 1030 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 MED10Q9BTT4 135 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 ATF7P17544 494 aaPredicted RBP21.57■■□□□ 1.04
LMO4-202ENST00000370544 OAS2P29728 719 aaKnown RBP21.57■■□□□ 1.04
LMO4-202ENST00000370544 GABPAQ06546 454 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 RASGRF1Q13972 1273 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 TBCKQ8TEA7 893 aa21.57■■□□□ 1.04
LMO4-202ENST00000370544 PALLDQ8WX93 1383 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 H7C1W4 665 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 GMNNO75496 209 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 KRT81Q14533 505 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 KRT71Q3SY84 523 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 KRT27Q7Z3Y8 459 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 PGBD1Q96JS3 809 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 CHD1O14646 1710 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 EXOC3L4Q17RC7 722 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 ANKFY1Q9P2R3 1169 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 SRP68Q9UHB9 627 aaKnown RBP21.56■■□□□ 1.04
LMO4-202ENST00000370544 TTLL3Q9Y4R7 772 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 COBLO75128 1261 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 TMEM191BP0C7N4 346 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 USP14P54578 494 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 GRAPQ13588 217 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms