RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 USP38Q8NB14 1042 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 LBHD1Q9BQE6 289 aaPredicted RBP17.44■□□□□ 0.38
LMO4-201ENST00000370542 FBXO40Q9UH90 709 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 LTBP2Q14767 1821 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 ZNF536O15090 1300 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 ADCYAP1R1P41586 468 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 CCSAPQ6IQ19 270 aaPredicted RBP17.43■□□□□ 0.38
LMO4-201ENST00000370542 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 KLHDC9Q8NEP7 349 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 STAG1Q8WVM7 1258 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 RAVER2Q9HCJ3 691 aaKnown RBP17.43■□□□□ 0.38
LMO4-201ENST00000370542 XPNPEP3Q9NQH7 507 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 ZMYM6O95789 1325 aa17.43■□□□□ 0.38
LMO4-201ENST00000370542 STAT2P52630 851 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 SHHQ15465 462 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 RNF180Q86T96 592 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 CPXCR1Q8N123 301 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 TSEN34Q9BSV6 310 aaKnown RBP17.42■□□□□ 0.38
LMO4-201ENST00000370542 OSBPL3Q9H4L5 887 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
LMO4-201ENST00000370542 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 ZNF500O60304 480 aaPredicted RBP17.41■□□□□ 0.38
LMO4-201ENST00000370542 FGAP02671 866 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 NKX3-2P78367 333 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 RCSD1Q6JBY9 416 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 CHD1LQ86WJ1 897 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 KATNBL1Q9H079 304 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 TCP11L1Q9NUJ3 509 aa17.41■□□□□ 0.38
LMO4-201ENST00000370542 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
LMO4-201ENST00000370542 PGK1P00558 417 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
LMO4-201ENST00000370542 MCCP23508 829 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 CST5P28325 142 aaPredicted RBP17.4■□□□□ 0.38
LMO4-201ENST00000370542 SLC1A4P43007 532 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 TKFCQ3LXA3 575 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 TRIM60Q495X7 471 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 ATXN2LQ8WWM7 1075 aaKnown RBP17.4■□□□□ 0.38
LMO4-201ENST00000370542 FAM227BQ96M60 508 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 ABHD16BQ9H3Z7 469 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
LMO4-201ENST00000370542 NMT2O60551 498 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 ACVR2BQ13705 512 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 RABEP1Q15276 862 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 FERMT2Q96AC1 680 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 TOX2Q96NM4 488 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 ACAD9Q9H845 621 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
LMO4-201ENST00000370542 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
LMO4-201ENST00000370542 SYNRGQ9UMZ2 1314 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 MCM3APO60318 1980 aa17.39■□□□□ 0.37
LMO4-201ENST00000370542 A0A1W2PQ45 241 aaPredicted RBP17.38■□□□□ 0.37
LMO4-201ENST00000370542 A0A1W2PQY0 241 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 TRIM43BA6NCK2 446 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 TLE2Q04725 743 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 ANKRD33Q7Z3H0 272 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
LMO4-201ENST00000370542 TRIM43Q96BQ3 446 aaPredicted RBP17.38■□□□□ 0.37
LMO4-201ENST00000370542 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
LMO4-201ENST00000370542 UPF3AQ9H1J1 476 aaKnown RBP17.38■□□□□ 0.37
LMO4-201ENST00000370542 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
LMO4-201ENST00000370542 ADCY6O43306 1168 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
LMO4-201ENST00000370542 PCP11498 1178 aaKnown RBP17.37■□□□□ 0.37
LMO4-201ENST00000370542 ACLYP53396 1101 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 GJA9P57773 515 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 ARMCX2Q7L311 632 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 ADAMTS19Q8TE59 1207 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 DCAF4Q8WV16 495 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 LENG1Q96BZ8 264 aaPredicted RBP17.37■□□□□ 0.37
LMO4-201ENST00000370542 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
LMO4-201ENST00000370542 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
LMO4-201ENST00000370542 KIAA0355O15063 1070 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 CDC45O75419 566 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
LMO4-201ENST00000370542 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms