RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZNFX1Q9P2E3 1918 aaKnown RBP15.94■□□□□ 0.14
SSR4-202ENST00000370085 CPLX1O14810 134 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 ADCY3O60266 1144 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 CYP2B6P20813 491 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 GRK4P32298 578 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 UBXN2AP68543 259 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 AKAP17AQ02040 695 aaKnown RBP15.94■□□□□ 0.14
SSR4-202ENST00000370085 TOB2Q14106 344 aaPredicted RBP15.94■□□□□ 0.14
SSR4-202ENST00000370085 RABEP1Q15276 862 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSR4-202ENST00000370085 MCF2L2Q86YR7 1114 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 RAB11FIP4Q86YS3 637 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 RIPK3Q9Y572 518 aa15.94■□□□□ 0.14
SSR4-202ENST00000370085 ST18O60284 1047 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 HOXC6P09630 235 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 PDIA3P30101 505 aaKnown RBP15.93■□□□□ 0.14
SSR4-202ENST00000370085 CAP1Q01518 475 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 MTMR8Q96EF0 704 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 PIGSQ96S52 555 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
SSR4-202ENST00000370085 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
SSR4-202ENST00000370085 NID2Q14112 1375 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 CDKL5O76039 1030 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 PLEKHA8P1O95397 391 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 HMGCRP04035 888 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 AK2P54819 239 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 MFSD14CQ5VZR4 134 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 NSMFQ6X4W1 530 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 SRBD1Q8N5C6 995 aaKnown RBP15.92■□□□□ 0.14
SSR4-202ENST00000370085 USP6NLQ92738 828 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 TBC1D32Q96NH3 1257 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
SSR4-202ENST00000370085 SLKQ9H2G2 1235 aaPredicted RBP15.92■□□□□ 0.14
SSR4-202ENST00000370085 HPS5Q9UPZ3 1129 aa15.92■□□□□ 0.14
SSR4-202ENST00000370085 PTPDC1A2A3K4 754 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 B4DLN1 442 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 hCG_1984214I3L0E3 225 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 CYTH3O43739 400 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 MRPL12P52815 198 aaKnown RBP15.91■□□□□ 0.14
SSR4-202ENST00000370085 TRIM22Q8IYM9 498 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 SAMD3Q8N6K7 520 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 ZNF713Q8N859 430 aaPredicted RBP15.91■□□□□ 0.14
SSR4-202ENST00000370085 RGS22Q8NE09 1264 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
SSR4-202ENST00000370085 ADD3Q9UEY8 706 aaKnown RBP15.91■□□□□ 0.14
SSR4-202ENST00000370085 ADD1P35611 737 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 CCT2P78371 535 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
SSR4-202ENST00000370085 OLFML2BQ68BL8 750 aa15.9■□□□□ 0.14
SSR4-202ENST00000370085 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
SSR4-202ENST00000370085 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 MSL3Q8N5Y2 521 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
SSR4-202ENST00000370085 CYP39A1Q9NYL5 469 aa15.9■□□□□ 0.14
SSR4-202ENST00000370085 PLXNA1Q9UIW2 1896 aa15.9■□□□□ 0.14
SSR4-202ENST00000370085 PGK2P07205 417 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 ELNP15502 786 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 CDC27P30260 824 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 STK3Q13188 491 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
SSR4-202ENST00000370085 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
SSR4-202ENST00000370085 ARMC5Q96C12 935 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 ZSCAN31Q96LW9 406 aaPredicted RBP15.89■□□□□ 0.13
SSR4-202ENST00000370085 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 CNTNAP5Q8WYK1 1306 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 SMCHD1A6NHR9 2005 aa15.89■□□□□ 0.13
SSR4-202ENST00000370085 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 DNAJC25-GNG10A0A024R161 153 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 LOC102724159A0A0B4J2E5 919 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 ASB14A6NK59 587 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 NFIBO00712 420 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 PFKFB2O60825 505 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 COBLO75128 1261 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 IFNAR1P17181 557 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 MCM2P49736 904 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 SSRP1Q08945 709 aaKnown RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 BAATQ14032 418 aaPredicted RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 PWP2Q15269 919 aaKnown RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 ZNF792Q3KQV3 632 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 NOL8Q76FK4 1167 aaKnown RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 SH3TC2Q8TF17 1288 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 CLEC4DQ8WXI8 215 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 CUL5Q93034 780 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 MAML3Q96JK9 1138 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 RNF26Q9BY78 433 aaPredicted RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 GLT8D2Q9H1C3 349 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 FAM217BQ9NTX9 383 aaPredicted RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 TPCN1Q9ULQ1 816 aa15.88■□□□□ 0.13
SSR4-202ENST00000370085 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
SSR4-202ENST00000370085 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
SSR4-202ENST00000370085 CFBP00751 764 aa15.87■□□□□ 0.13
SSR4-202ENST00000370085 INHAP05111 366 aa15.87■□□□□ 0.13
SSR4-202ENST00000370085 CALML3P27482 149 aa15.87■□□□□ 0.13
SSR4-202ENST00000370085 RPS6P62753 249 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms