RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 AMPD2Q01433 879 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
LRIF1-201ENST00000369763 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 MARCH10Q8NA82 808 aaPredicted RBP12.18□□□□□ -0.46
LRIF1-201ENST00000369763 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 TOGARAM1Q9Y4F4 1720 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 TAF1P21675 1872 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 BUB1O43683 1085 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 MOCS3O95396 460 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
LRIF1-201ENST00000369763 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 CCDC42Q96M95 316 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 EHD4Q9H223 541 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 TCP11L1Q9NUJ3 509 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
LRIF1-201ENST00000369763 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRIF1-201ENST00000369763 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
LRIF1-201ENST00000369763 SEMA3EO15041 775 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 APBA1Q02410 837 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 COG1Q8WTW3 980 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 FRMPD2Q68DX3 1309 aaPredicted RBP12.17□□□□□ -0.46
LRIF1-201ENST00000369763 ITIH6Q6UXX5 1313 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 STRCP1A6NGW2 1772 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 KRT86O43790 486 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 CALML3P27482 149 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 GGCXP38435 758 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
LRIF1-201ENST00000369763 CRACR2AQ9BSW2 395 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF804BA4D1E1 1349 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 KLRC4O43908 158 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 RCAN1P53805 252 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
LRIF1-201ENST00000369763 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 RRP15Q9Y3B9 282 aaKnown RBP12.17□□□□□ -0.46
LRIF1-201ENST00000369763 CAPN6Q9Y6Q1 641 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 NID2Q14112 1375 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 LRP6O75581 1613 aa12.17□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF142P52746 1687 aaPredicted RBP12.17□□□□□ -0.46
LRIF1-201ENST00000369763 AKR1B10O60218 316 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 TTI2Q6NXR4 508 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 DNAAF5Q86Y56 855 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 SPA17Q15506 151 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 POTEMA6NI47 508 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF263O14978 683 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 USP14P54578 494 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 SND1Q7KZF4 910 aaKnown RBP eCLIP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 COA7Q96BR5 231 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 CWC15Q9P013 229 aaKnown RBP12.16□□□□□ -0.46
LRIF1-201ENST00000369763 CAPN11Q9UMQ6 739 aa12.16□□□□□ -0.46
LRIF1-201ENST00000369763 DCCP43146 1447 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 TRIM14Q14142 442 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 LINC00116Q8NCU8 138 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 HNRNPLLQ8WVV9 542 aaKnown RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 P2RX5Q93086 422 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 F8W031 263 aaPredicted RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 TRAPPC10P48553 1259 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 DNM2P50570 870 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 MS4A14Q96JA4 679 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 PIGSQ96S52 555 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
LRIF1-201ENST00000369763 DMGDHQ9UI17 866 aaKnown RBP12.15□□□□□ -0.46
LRIF1-201ENST00000369763 MARCH6O60337 910 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 KRT83P78385 493 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms