RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 LETM2Q2VYF4 491 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 DCAF15Q66K64 600 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 MEIS2O14770 477 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 SYKP43405 635 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 TYRO3Q06418 890 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 SPP2Q13103 211 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 KIAA1683Q9H0B3 1180 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 PSTPIP2Q9H939 334 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 TDP2O95551 362 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 TBC1D5Q92609 795 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 RANBP17Q9H2T7 1088 aaKnown RBP16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.07■□□□□ 0.16
HMGCS2-201ENST00000369406 SLC37A4O43826 429 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 CDC25AP30304 524 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 MOB2Q70IA6 237 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 PDILTQ8N807 584 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 CUL5Q93034 780 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 WNK4Q96J92 1243 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 CCNT1O60563 726 aaKnown RBP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 VCAM1P19320 739 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 EPHX2P34913 555 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 NEK8Q86SG6 692 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 GRAMD1CQ8IYS0 662 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 SH2D4AQ9H788 454 aa16.06■□□□□ 0.16
HMGCS2-201ENST00000369406 ZNF536O15090 1300 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 L1TD1Q5T7N2 865 aaKnown RBP16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 GJA10Q969M2 543 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 GLTPD2A6NH11 291 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 HOXA13P31271 388 aaPredicted RBP16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 ZHX2Q9Y6X8 837 aa16.05■□□□□ 0.16
HMGCS2-201ENST00000369406 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 PNOCQ13519 176 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 VGLL4Q14135 290 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 FERMT2Q96AC1 680 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 DCPSQ96C86 337 aaKnown RBP16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 ACTN4O43707 911 aaKnown RBP16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 PLA2G6O60733 806 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 BMP15O95972 392 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 FMR1Q06787 632 aaKnown RBP eCLIP16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 ANO6Q4KMQ2 910 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 C11orf57Q6ZUT1 292 aaPredicted RBP16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
HMGCS2-201ENST00000369406 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 HMGCS2P54868 508 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 BACE1P56817 501 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 MDM2Q00987 491 aaPredicted RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 RPAP3Q9H6T3 665 aaPredicted RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 CCDC192P0DO97 292 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 NOL9Q5SY16 702 aaKnown RBP16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 CHURC1Q8WUH1 139 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 CRYGNQ8WXF5 182 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 DNAJC25Q9H1X3 360 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 PICK1Q9NRD5 415 aa16.03■□□□□ 0.16
HMGCS2-201ENST00000369406 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.16
HMGCS2-201ENST00000369406 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.16
HMGCS2-201ENST00000369406 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.16
HMGCS2-201ENST00000369406 TIGD1Q96MW7 591 aa16.02■□□□□ 0.16
HMGCS2-201ENST00000369406 BIN1O00499 593 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 NEMFO60524 1076 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 CASP1P29466 404 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms