RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CLIC2O15247 247 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 MYL7Q01449 175 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 PNMA1Q8ND90 353 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 RPN1P04843 607 aaKnown RBP19.89■□□□□ 0.77
SNX27-202ENST00000368841 NDUFA8P51970 172 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 TROVE2P10155 538 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX27-202ENST00000368841 PDE6BP35913 854 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 HADHQ16836 314 aaKnown RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 GLT8D2Q9H1C3 349 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 ATF2P15336 505 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 CPSF2Q9P2I0 782 aaKnown RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 CAPN7Q9Y6W3 813 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 M0R2C6 588 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 IMPACTQ9P2X3 320 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 MARK3P27448 753 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 YWHAGP61981 247 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX27-202ENST00000368841 YWHAEP62258 255 aaKnown RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 GPR101Q96P66 508 aaPredicted RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 DBNDD1Q9H9R9 158 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 KIAA1024Q9UPX6 916 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 TNKSO95271 1327 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 DYNLL1P63167 89 aaKnown RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 RPS6KC1Q96S38 1066 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 NT5C3AQ9H0P0 336 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 PHBP35232 272 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 RPS8P62241 208 aaKnown RBP19.88■□□□□ 0.77
SNX27-202ENST00000368841 ADAM9Q13443 819 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 DPP9Q86TI2 863 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 GRAMD1CQ8IYS0 662 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 UBN1Q9NPG3 1134 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 RIC8AQ9NPQ8 531 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 USH1CQ9Y6N9 552 aa19.88■□□□□ 0.77
SNX27-202ENST00000368841 MTMR3Q13615 1198 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 MYSM1Q5VVJ2 828 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 CXorf38Q8TB03 319 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 ZNF148Q9UQR1 794 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 LRRN2O75325 713 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 BFSP1Q12934 665 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 PKP1Q13835 747 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 ADPGKQ9BRR6 497 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 CDC26Q8NHZ8 85 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 LMBRD1Q9NUN5 540 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 TMEM63CQ9P1W3 806 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 TPX2Q9ULW0 747 aaKnown RBP19.87■□□□□ 0.77
SNX27-202ENST00000368841 A6NJR5 290 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 ARHGAP6O43182 974 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 TRIP13Q15645 432 aaPredicted RBP19.87■□□□□ 0.77
SNX27-202ENST00000368841 USPL1Q5W0Q7 1092 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 USP28Q96RU2 1077 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
SNX27-202ENST00000368841 SCARA5Q6ZMJ2 495 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 MIGA2Q7L4E1 593 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 HOOK2Q96ED9 719 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 CFAP36Q96G28 342 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 G3BP2Q9UN86 482 aaKnown RBP19.86■□□□□ 0.77
SNX27-202ENST00000368841 ZMYM6O95789 1325 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 OR52Z1P0C646 297 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 GREM2Q9H772 168 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 FANCLQ9NW38 375 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 TLR3O15455 904 aaKnown RBP19.86■□□□□ 0.77
SNX27-202ENST00000368841 KRT3P12035 628 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 NOSTRINQ8IVI9 506 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 PABPC4Q13310 644 aaKnown RBP eCLIP19.86■□□□□ 0.77
SNX27-202ENST00000368841 ARHGAP24Q8N264 748 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
SNX27-202ENST00000368841 NBPF3Q9H094 633 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 ATP8A2Q9NTI2 1148 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 PALD1Q9ULE6 856 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 BANK1Q8NDB2 785 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 GOLGA8SH3BPF8 625 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 GNA14O95837 355 aa19.86■□□□□ 0.77
SNX27-202ENST00000368841 SPECC1L-ADORA2AF8WAN1 911 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 CXCR5P32302 372 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 IFNAR2P48551 515 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 EIF4A1P60842 406 aaKnown RBP19.85■□□□□ 0.77
SNX27-202ENST00000368841 CCDC68Q9H2F9 335 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 ANAPC5Q9UJX4 755 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 MRPL11Q9Y3B7 192 aaKnown RBP19.85■□□□□ 0.77
SNX27-202ENST00000368841 ABCB5Q2M3G0 1257 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 NEK8Q86SG6 692 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 BTBD18B2RXH4 712 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 EHHADHQ08426 723 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 C2orf54Q08AI8 447 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 TLR7Q9NYK1 1049 aaKnown RBP19.85■□□□□ 0.77
SNX27-202ENST00000368841 HESX1Q9UBX0 185 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
SNX27-202ENST00000368841 SLFN13Q68D06 897 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 PPP2R2CQ9Y2T4 447 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 CCNYQ8ND76 341 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 SEC31AO94979 1220 aaKnown RBP19.84■□□□□ 0.77
SNX27-202ENST00000368841 PTGDRQ13258 359 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 C7orf31Q8N865 590 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 P3H4Q92791 437 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.84■□□□□ 0.77
SNX27-202ENST00000368841 ANGPTL3Q9Y5C1 460 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 PPEF1O14829 653 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms