RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
SNX27-201ENST00000368838 STX6O43752 255 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 DDAH1O94760 285 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 IFNAR1P17181 557 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 VCAM1P19320 739 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 SMARCA1P28370 1054 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 MAPK4P31152 587 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 NFKBIBQ15653 356 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 AMHR2Q16671 573 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 PLEKHH3Q7Z736 793 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 CCDC83Q8IWF9 413 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 NEDD1Q8NHV4 660 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 SOCS4Q8WXH5 440 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 DYNLL2Q96FJ2 89 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 CCDC17Q96LX7 622 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 UBAC1Q9BSL1 405 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 PRO3102Q9H379 93 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 RPAP3Q9H6T3 665 aaPredicted RBP10.2□□□□□ -0.78
SNX27-201ENST00000368838 CABP5Q9NP86 173 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 FLRT1Q9NZU1 646 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 BRPF3Q9ULD4 1205 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 LAMA3Q16787 3333 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 KLF18A0A0U1RQI7 1052 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 A0A1W2PRG0 241 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 CTDNEP1O95476 244 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 ZSCAN22P10073 491 aaPredicted RBP10.19□□□□□ -0.78
SNX27-201ENST00000368838 GJB2P29033 226 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 MCM4P33991 863 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 RGS2P41220 211 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 APOBRQ0VD83 1088 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 TROAPQ12815 778 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 WTAPQ15007 396 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 NTRK3Q16288 839 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 TMEM67Q5HYA8 995 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 MORN1Q5T089 497 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 MAP3K21Q5TCX8 1036 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 SYNE3Q6ZMZ3 975 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 CATSPERGQ6ZRH7 1159 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 USP6NLQ92738 828 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 TCEANC2Q96MN5 208 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 KIAA1683Q9H0B3 1180 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 C11orf49Q9H6J7 331 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 GINM1Q9NU53 330 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
SNX27-201ENST00000368838 MTMR6Q9Y217 621 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 SLC12A7Q9Y666 1083 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 PFASO15067 1338 aa10.19□□□□□ -0.78
SNX27-201ENST00000368838 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 GREB1LQ9C091 1923 aaPredicted RBP10.18□□□□□ -0.78
SNX27-201ENST00000368838 ZBTB43O43298 467 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
SNX27-201ENST00000368838 CNGA1P29973 690 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 USP14P54578 494 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 KIAA1755Q5JYT7 1200 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 RCSD1Q6JBY9 416 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 SPICE1Q8N0Z3 855 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 STK11IPQ8N1F8 1099 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 ENAHQ8N8S7 591 aaPredicted RBP10.18□□□□□ -0.78
SNX27-201ENST00000368838 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 TMEM87AQ8NBN3 555 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 C12orf42Q96LP6 360 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 APBA2Q99767 749 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 ANP32EQ9BTT0 268 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 ZSCAN16Q9H4T2 348 aaPredicted RBP10.18□□□□□ -0.78
SNX27-201ENST00000368838 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
SNX27-201ENST00000368838 OGDHLQ9ULD0 1010 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 RABGAP1Q9Y3P9 1069 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 TNKSO95271 1327 aa10.18□□□□□ -0.78
SNX27-201ENST00000368838 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 CCDC69A6NI79 296 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 GOLGA6L22H0YM25 854 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 BAG4O95429 457 aaKnown RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 AKR1B1P15121 316 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 RASA1P20936 1047 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 CYP2C19P33261 490 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 CDK8P49336 464 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 ANO1Q5XXA6 986 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 LARP1BQ659C4 914 aaKnown RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 LHX8Q68G74 356 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 NPLOC4Q8TAT6 608 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 WASF1Q92558 559 aa10.17□□□□□ -0.78
SNX27-201ENST00000368838 TMEM121BQ9BXQ6 578 aaPredicted RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 RNF26Q9BY78 433 aaPredicted RBP10.17□□□□□ -0.78
SNX27-201ENST00000368838 GOLGA8BA8MQT2 603 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 CPLX1O14810 134 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 F13A1P00488 732 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms