RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PTGDRQ13258 359 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 PTPN14Q15678 1187 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 KIAA1755Q5JYT7 1200 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 TTC38Q5R3I4 469 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 SYT10Q6XYQ8 523 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 FOCADQ5VW36 1801 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 IGKV6D-41A0A0C4DH26 115 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 F5H6K3 240 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 PPP1R11O60927 126 aaPredicted RBP12.06□□□□□ -0.48
TPM3-212ENST00000368533 KLRC3Q07444 240 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 GNAQP50148 359 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 PNOCQ13519 176 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 CCDC178Q5BJE1 867 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 SARM1Q6SZW1 724 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
TPM3-212ENST00000368533 LONRF3Q496Y0 759 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 HSP90AA4PQ58FG1 418 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
TPM3-212ENST00000368533 TRPM4Q8TD43 1214 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
TPM3-212ENST00000368533 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 HACL1Q9UJ83 578 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 PCDHA6Q9UN73 950 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 PCDHA8Q9Y5H6 950 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
TPM3-212ENST00000368533 MYH4Q9Y623 1939 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
TPM3-212ENST00000368533 NDUFB10O96000 172 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 CDC25BP30305 580 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 EPS15P42566 896 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
TPM3-212ENST00000368533 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
TPM3-212ENST00000368533 NEMFO60524 1076 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 ENTPD3O75355 529 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 TNNI2P48788 182 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 AGBL3Q8NEM8 1001 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 FAM151AQ8WW52 585 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 DHX58Q96C10 678 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 KANSL2Q9H9L4 492 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 FBXO2Q9UK22 296 aaPredicted RBP12.04□□□□□ -0.48
TPM3-212ENST00000368533 SMCHD1A6NHR9 2005 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 NRDCO43847 1150 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 SERPINC1P01008 464 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 CMA1P23946 247 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 AFMP43652 599 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 TNIP1Q15025 636 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
TPM3-212ENST00000368533 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 MRIQ9BWK5 157 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 EHD4Q9H223 541 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
TPM3-212ENST00000368533 ANGEL2Q5VTE6 544 aaKnown RBP12.03□□□□□ -0.48
TPM3-212ENST00000368533 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 TMEM179Q6ZVK1 233 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 TMEM60Q9H2L4 133 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 A0A087X0B3 334 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
TPM3-212ENST00000368533 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-212ENST00000368533 NLRP12P59046 1061 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 SYCP1Q15431 976 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 CNNM3Q8NE01 707 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 SPZ1Q9BXG8 430 aa12.03□□□□□ -0.48
TPM3-212ENST00000368533 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
TPM3-212ENST00000368533 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms