RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MROH8Q9H579 483 aa16.08■□□□□ 0.16
TPM3-211ENST00000368531 PCDHA1Q9Y5I3 950 aa16.08■□□□□ 0.16
TPM3-211ENST00000368531 IVNS1ABPQ9Y6Y0 642 aa16.08■□□□□ 0.16
TPM3-211ENST00000368531 IFNAR1P17181 557 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 MCM2P49736 904 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 ST3GAL1Q11201 340 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.161e-12■□□□□ 9.1
TPM3-211ENST00000368531 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
TPM3-211ENST00000368531 SH2B1Q9NRF2 756 aaPredicted RBP16.07■□□□□ 0.16
TPM3-211ENST00000368531 ABCB11O95342 1321 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
TPM3-211ENST00000368531 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 COPB2P35606 906 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 CHST13Q8NET6 341 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 MMP19Q99542 508 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 GABRQQ9UN88 632 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
TPM3-211ENST00000368531 NFIBO00712 420 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 JAK2O60674 1132 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 CDKL5O76039 1030 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 FCER1AP12319 257 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 PTPREP23469 700 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 CLEC4DQ8WXI8 215 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 RNF26Q9BY78 433 aaPredicted RBP16.05■□□□□ 0.16
TPM3-211ENST00000368531 PNMA2Q9UL42 364 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 MRPL11Q9Y3B7 192 aaKnown RBP16.05■□□□□ 0.16
TPM3-211ENST00000368531 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
TPM3-211ENST00000368531 PLXNA1Q9UIW2 1896 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 PGK2P07205 417 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 SCG2P13521 617 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 HOXD10P28358 340 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 FOSBP53539 338 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 KCTD2Q14681 263 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 PKN1Q16512 942 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 WWC2Q6AWC2 1192 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
TPM3-211ENST00000368531 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 AIFM3Q96NN9 605 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 ORC3Q9UBD5 711 aaPredicted RBP16.04■□□□□ 0.16
TPM3-211ENST00000368531 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
TPM3-211ENST00000368531 RBBP6Q7Z6E9 1792 aaKnown RBP16.04■□□□□ 0.16
TPM3-211ENST00000368531 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 STRNO43815 780 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 CFBP00751 764 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 CYP2B6P20813 491 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 ADORA2AP29274 412 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 FLT3LGP49771 235 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 NAPAP54920 295 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 PRKCZQ05513 592 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 TRAF1Q13077 416 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 BAATQ14032 418 aaPredicted RBP16.03■□□□□ 0.16
TPM3-211ENST00000368531 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
TPM3-211ENST00000368531 DPP9Q86TI2 863 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 HSCBQ8IWL3 235 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
TPM3-211ENST00000368531 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
TPM3-211ENST00000368531 SRRDQ9UH36 339 aa16.03■□□□□ 0.16
TPM3-211ENST00000368531 STXBP3O00186 592 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 DEXIO95424 95 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 CALML3P27482 149 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 MORN1Q5T089 497 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 SNX21Q969T3 373 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
TPM3-211ENST00000368531 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 GJD2Q9UKL4 321 aa16.02■□□□□ 0.16
TPM3-211ENST00000368531 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
TPM3-211ENST00000368531 COBLO75128 1261 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
TPM3-211ENST00000368531 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 MAP2K5Q13163 448 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 GRB14Q14449 540 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 TYW1BQ6NUM6 668 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
TPM3-211ENST00000368531 NPLOC4Q8TAT6 608 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 RAET1EQ8TD07 263 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 SOCS4Q8WXH5 440 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 LLPHQ9BRT6 129 aaKnown RBP16.01■□□□□ 0.15
TPM3-211ENST00000368531 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 BARHL2Q9NY43 387 aa16.01■□□□□ 0.15
TPM3-211ENST00000368531 STK36Q9NRP7 1315 aa16■□□□□ 0.15
TPM3-211ENST00000368531 LCTP09848 1927 aa16■□□□□ 0.15
TPM3-211ENST00000368531 POTEB2H3BUK9 544 aa16■□□□□ 0.15
TPM3-211ENST00000368531 OPLAHO14841 1288 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms