RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
TPM3-210ENST00000368530 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 ZNFX1Q9P2E3 1918 aaKnown RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 IGKV6D-41A0A0C4DH26 115 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 F5H6K3 240 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 ATP2A1O14983 1001 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 CLTBP09497 229 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 FGD1P98174 961 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 KLRC3Q07444 240 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 FOXD4L5Q5VV16 416 aaPredicted RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 Q6ZUG5 572 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
TPM3-210ENST00000368530 ANKRD33Q7Z3H0 272 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 RNF180Q86T96 592 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 NECAB1Q8N987 351 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 FOXD4L4Q8WXT5 416 aaPredicted RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 FGD4Q96M96 766 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 TOX2Q96NM4 488 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
TPM3-210ENST00000368530 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
TPM3-210ENST00000368530 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
TPM3-210ENST00000368530 ADCY6O43306 1168 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 AKR1A1P14550 325 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 ACLYP53396 1101 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 STK3Q13188 491 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 ANKRD1Q15327 319 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 ME3Q16798 604 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 MSL3Q8N5Y2 521 aaKnown RBP11.62□□□□□ -0.55
TPM3-210ENST00000368530 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 INTS4Q96HW7 963 aaKnown RBP11.62□□□□□ -0.55
TPM3-210ENST00000368530 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
TPM3-210ENST00000368530 SLF1Q9BQI6 1058 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 ARPP21Q9UBL0 812 aaPredicted RBP11.62□□□□□ -0.55
TPM3-210ENST00000368530 SYNGAP1Q96PV0 1343 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 SYNRGQ9UMZ2 1314 aa11.62□□□□□ -0.55
TPM3-210ENST00000368530 MYADML2A6NDP7 307 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 ZNF213O14771 459 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 NDUFB10O96000 172 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 COPB2P35606 906 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 CDK7P50613 346 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 NUCB2P80303 420 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 KCNA10Q16322 511 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 AMOTL1Q8IY63 956 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
TPM3-210ENST00000368530 MAFAQ8NHW3 353 aaPredicted RBP11.61□□□□□ -0.55
TPM3-210ENST00000368530 MKL1Q969V6 931 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 TEX13BQ9BXU2 312 aa11.61□□□□□ -0.55
TPM3-210ENST00000368530 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
TPM3-210ENST00000368530 SH2B1Q9NRF2 756 aaPredicted RBP11.61□□□□□ -0.55
TPM3-210ENST00000368530 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 CTAGE5O15320 804 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 PQBP1O60828 265 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 MCM4P33991 863 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 ST3GAL1Q11201 340 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 BRF1Q92994 677 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 KATNBL1Q9H079 304 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 TBX21Q9UL17 535 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 FAM184BQ9ULE4 1060 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 TMEM265A0A087WTH1 108 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 DUSP11O75319 330 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 RAG1P15918 1043 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 CST5P28325 142 aaPredicted RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 TDO2P48775 406 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 NKX3-2P78367 333 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 FPGSQ05932 587 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 ACVR2BQ13705 512 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 IFNL3Q8IZI9 196 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 NAPBQ9H115 298 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 NAP1L2Q9ULW6 460 aaPredicted RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 CNPY2Q9Y2B0 182 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
TPM3-210ENST00000368530 MYH8P13535 1937 aa11.6□□□□□ -0.55
TPM3-210ENST00000368530 PLXNA1Q9UIW2 1896 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 RAD21O60216 631 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 TIMP1P01033 207 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms