RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MYH4Q9Y623 1939 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 SMPD1P17405 629 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 RFC2P35250 354 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 CNTN2Q02246 1040 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
VAMP4-202ENST00000367740 POLA2Q14181 598 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 CPXCR1Q8N123 301 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 SCN10AQ9Y5Y9 1956 aa17.69■□□□□ 0.42
VAMP4-202ENST00000367740 GRXCR2A6NFK2 248 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
VAMP4-202ENST00000367740 ST18O60284 1047 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 ZEB2O60315 1214 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 PDE6AP16499 860 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 CDK8P49336 464 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 EAF2Q96CJ1 260 aaPredicted RBP17.68■□□□□ 0.42
VAMP4-202ENST00000367740 AP5M1Q9H0R1 490 aa17.68■□□□□ 0.42
VAMP4-202ENST00000367740 RAVER2Q9HCJ3 691 aaKnown RBP17.68■□□□□ 0.42
VAMP4-202ENST00000367740 CYP2D7A0A087X1C5 515 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 SUPT20HL2P0C7V6 817 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 TMCO2Q7Z6W1 182 aaPredicted RBP17.67■□□□□ 0.42
VAMP4-202ENST00000367740 FAM133AQ8N9E0 248 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 SUGCTQ9HAC7 445 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 FBXO40Q9UH90 709 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 MTUS1Q9ULD2 1270 aa17.67■□□□□ 0.42
VAMP4-202ENST00000367740 DDX49Q9Y6V7 483 aaKnown RBP17.67■□□□□ 0.42
VAMP4-202ENST00000367740 TRIP12Q14669 1992 aaPredicted RBP17.66■□□□□ 0.42
VAMP4-202ENST00000367740 BAIAP3O94812 1187 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
VAMP4-202ENST00000367740 CHST13Q8NET6 341 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 PRSS33Q8NF86 280 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
VAMP4-202ENST00000367740 SLC38A10Q9HBR0 1119 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 PDGFCQ9NRA1 345 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 ZNF532Q9HCE3 1301 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 SPTBN4Q9H254 2564 aa17.66■□□□□ 0.42
VAMP4-202ENST00000367740 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 SOWAHBA6NEL2 793 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 IQCF3P0C7M6 154 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 ZP2Q05996 745 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 NEK9Q8TD19 979 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
VAMP4-202ENST00000367740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
VAMP4-202ENST00000367740 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.65■□□□□ 0.42
VAMP4-202ENST00000367740 TECTAO75443 2155 aa17.64■□□□□ 0.42
VAMP4-202ENST00000367740 PRKAB2O43741 272 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 ZBED4O75132 1171 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
VAMP4-202ENST00000367740 KCNJ6P48051 423 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 ERVK-21P61565 698 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
VAMP4-202ENST00000367740 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 TAPT1Q6NXT6 567 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 FBXO16Q8IX29 292 aaPredicted RBP17.64■□□□□ 0.41
VAMP4-202ENST00000367740 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 MFSD14AQ96MC6 490 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 HOMER2Q9NSB8 354 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 Q9Y3F1 56 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 DCHS1Q96JQ0 3298 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 KMT2EQ8IZD2 1858 aa17.64■□□□□ 0.41
VAMP4-202ENST00000367740 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 ASB14A6NK59 587 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 H3BQ06 376 aaPredicted RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 NDUFB10O96000 172 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 DEFB103AP81534 67 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 PURAQ00577 322 aaKnown RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 PUS10Q3MIT2 529 aaKnown RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
VAMP4-202ENST00000367740 CTDP1Q9Y5B0 961 aaPredicted RBP17.63■□□□□ 0.41
VAMP4-202ENST00000367740 ATG2AQ2TAZ0 1938 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 DMDP11532 3685 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 LINC01553A4QN01 128 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 F5H6K3 240 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 OAZ1P54368 228 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 KLRC3Q07444 240 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 IQSEC1Q6DN90 963 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 EEPD1Q7L9B9 569 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
VAMP4-202ENST00000367740 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
VAMP4-202ENST00000367740 MYH7P12883 1935 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 BCAR3O75815 825 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 FOXK2Q01167 660 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
VAMP4-202ENST00000367740 PPP1R13LQ8WUF5 828 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 ACAD9Q9H845 621 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 POLR3EQ9NVU0 708 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 PRKAG3Q9UGI9 489 aa17.61■□□□□ 0.41
VAMP4-202ENST00000367740 NOP58Q9Y2X3 529 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms