RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 TMEM39AQ9NV64 488 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 SLC4A4Q9Y6R1 1079 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 CHD9Q3L8U1 2897 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 IGKV6D-41A0A0C4DH26 115 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 DUSP11O75319 330 aaKnown RBP11.76□□□□□ -0.53
NUP43-203ENST00000367404 RASA1P20936 1047 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 RASIP1Q5U651 963 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
NUP43-203ENST00000367404 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 FGD4Q96M96 766 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
NUP43-203ENST00000367404 PUS7LQ9H0K6 701 aaKnown RBP11.76□□□□□ -0.53
NUP43-203ENST00000367404 UPF3AQ9H1J1 476 aaKnown RBP11.76□□□□□ -0.53
NUP43-203ENST00000367404 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 DDX19BQ9UMR2 479 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 RIPK3Q9Y572 518 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 ELP1O95163 1332 aa11.76□□□□□ -0.53
NUP43-203ENST00000367404 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
NUP43-203ENST00000367404 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
NUP43-203ENST00000367404 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 DCDC2CA8MYV0 355 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 ADCY6O43306 1168 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 NDUFB10O96000 172 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 TIMP1P01033 207 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 MS4A1P11836 297 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 CDK7P50613 346 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 NKX3-2P78367 333 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 KCNA10Q16322 511 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 GIMAP6Q6P9H5 292 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 PRPF38AQ8NAV1 312 aaKnown RBP11.75□□□□□ -0.53
NUP43-203ENST00000367404 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.75□□□□□ -0.536e-8■□□□□ 8.6
NUP43-203ENST00000367404 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 TSR3Q9UJK0 312 aaKnown RBP11.75□□□□□ -0.53
NUP43-203ENST00000367404 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
NUP43-203ENST00000367404 MROH7Q68CQ1 1323 aa11.75□□□□□ -0.53
NUP43-203ENST00000367404 F5H6K3 240 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 GJA9P57773 515 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 KLRC3Q07444 240 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 NUDT18Q6ZVK8 323 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
NUP43-203ENST00000367404 TIFAQ96CG3 184 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
NUP43-203ENST00000367404 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 SLC38A10Q9HBR0 1119 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 SYNPO2Q9UMS6 1093 aa11.74□□□□□ -0.53
NUP43-203ENST00000367404 COL11A1P12107 1806 aaPredicted RBP11.74□□□□□ -0.53
NUP43-203ENST00000367404 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 CTAGE5O15320 804 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 MYH8P13535 1937 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 OAZ1P54368 228 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 PPIGQ13427 754 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■□□ 17.2
NUP43-203ENST00000367404 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 TMEM240Q5SV17 173 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 FAM126BQ8IXS8 530 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 PCSK9Q8NBP7 692 aaKnown RBP11.73□□□□□ -0.53
NUP43-203ENST00000367404 MKL1Q969V6 931 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 PLIN4Q96Q06 1357 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 EPB41L4AQ9HCS5 686 aaPredicted RBP11.73□□□□□ -0.53
NUP43-203ENST00000367404 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
NUP43-203ENST00000367404 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
NUP43-203ENST00000367404 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
NUP43-203ENST00000367404 ARVCFO00192 962 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 RAD21O60216 631 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 ZBED4O75132 1171 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 ASGR1P07306 291 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
NUP43-203ENST00000367404 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 GMCL1P1Q8NEA9 526 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 PBX4Q9BYU1 374 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 PLXNA1Q9UIW2 1896 aa11.72□□□□□ -0.53
NUP43-203ENST00000367404 CD4P01730 458 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 AKNAD1Q5T1N1 836 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 PSRC1Q6PGN9 363 aaPredicted RBP11.71□□□□□ -0.53
NUP43-203ENST00000367404 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 SLC43A3Q8NBI5 491 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 APPBP2Q92624 585 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
NUP43-203ENST00000367404 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms