RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 KDRP35968 1356 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 CLTAP09496 248 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 IL9RQ01113 521 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ACBD5Q5T8D3 534 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 NOSTRINQ8IVI9 506 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 C16orf71Q8IYS4 520 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 XAGE2Q96GT9 111 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 DHTKD1Q96HY7 919 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ATG3Q9NT62 314 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 CDC23Q9UJX2 597 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 PPP2R2CQ9Y2T4 447 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 PER1O15534 1290 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 CA8P35219 290 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 UAP1Q16222 522 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 SDCCAG3Q96C92 435 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 RPAP1Q9BWH6 1393 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ATP10DQ9P241 1426 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 PNMA6AP0CW24 399 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-209ENST00000367257 GAP43P17677 238 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 IL13P35225 146 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 PICALMQ13492 652 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 SLC4A8Q2Y0W8 1093 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 SLFNL1Q499Z3 407 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 AZI2Q9H6S1 392 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 ZC4H2Q9NQZ6 224 aa9.75□□□□□ -0.85
SYNE1-209ENST00000367257 B4E1Z4 1266 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 TTI1O43156 1089 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 OSBPL9Q96SU4 736 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 FGFR1OP2Q9NVK5 253 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 COL4A3BPQ9Y5P4 624 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 V9GY48 417 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MED23Q9ULK4 1368 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 H2AFZP0C0S5 128 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MORC3Q14149 939 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 TAF11Q15544 211 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 H2AFVQ71UI9 128 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MAP7D3Q8IWC1 876 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 RSAD2Q8WXG1 361 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 RUBCNQ92622 972 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 PBKQ96KB5 322 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 EYA1Q99502 592 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 TAB2Q9NYJ8 693 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MED14O60244 1454 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 XRN1Q8IZH2 1706 aaKnown RBP9.74□□□□□ -0.85
SYNE1-209ENST00000367257 OPHN1O60890 802 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 LMNAP02545 664 aaKnown RBP9.74□□□□□ -0.85
SYNE1-209ENST00000367257 CUL3Q13618 768 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 ZNF790Q6PG37 636 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 PALM2Q8IXS6 379 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 KRT12Q99456 494 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 XPO4Q9C0E2 1151 aaKnown RBP9.74□□□□□ -0.85
SYNE1-209ENST00000367257 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 GGA1Q9UJY5 639 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 TPD52L2O43399 206 aaKnown RBP9.74□□□□□ -0.85
SYNE1-209ENST00000367257 SEC24BO95487 1268 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MTX1Q13505 466 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 ALCAMQ13740 583 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 MCF2L2Q86YR7 1114 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 ZNF710Q8N1W2 664 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 EFHD1Q9BUP0 239 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 STAP2Q9UGK3 403 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 STK38LQ9Y2H1 464 aa9.74□□□□□ -0.85
SYNE1-209ENST00000367257 HNRNPCP07910 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 ITGA6P23229 1130 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 CLCN6P51797 869 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 CCDC93Q567U6 631 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 FBXO31Q5XUX0 539 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 FBXO38Q6PIJ6 1188 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 LRRC8AQ8IWT6 810 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 ANKRD35Q8N283 1001 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 CCDC197Q8NCU1 140 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 TXLNGQ9NUQ3 528 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 ARMCX3Q9UH62 379 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 CCDC151A5D8V7 595 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 F8W8V4 182 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 KRIT1O00522 736 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 TRIM66O15016 1216 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 TOM1O60784 492 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 GCKRQ14397 625 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 GLE1Q53GS7 698 aaKnown RBP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 RINT1Q6NUQ1 792 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 GSDMBQ8TAX9 411 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 FOXP1Q9H334 677 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-209ENST00000367257 VPS37BQ9H9H4 285 aa9.73□□□□□ -0.85
SYNE1-209ENST00000367257 SLC5A4Q9NY91 659 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms