RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 LAMA4Q16363 1823 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 LRRC37A2A6NM11 1700 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
CTSD-202ENST00000367196 ASGR1P07306 291 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 SDSP20132 328 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 HAND2P61296 217 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 NUCB1Q02818 461 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 TNFAIP2Q03169 654 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
CTSD-202ENST00000367196 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 GNASQ5JWF2 1037 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 SH3RF1Q7Z6J0 888 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 SLC17A8Q8NDX2 589 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
CTSD-202ENST00000367196 MPHOSPH6Q99547 160 aaKnown RBP17.45■□□□□ 0.38
CTSD-202ENST00000367196 ZNF213O14771 459 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
CTSD-202ENST00000367196 ZEB2O60315 1214 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 CABYRO75952 493 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 FPGSQ05932 587 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 SHHQ15465 462 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 SEZ6LQ9BYH1 1024 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 KATNBL1Q9H079 304 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 AP5M1Q9H0R1 490 aa17.44■□□□□ 0.38
CTSD-202ENST00000367196 MYADML2A6NDP7 307 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 SOWAHBA6NEL2 793 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 PDHBP11177 359 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 NKX3-2P78367 333 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
CTSD-202ENST00000367196 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 VTA1Q9NP79 307 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 Q9Y3F1 56 aa17.43■□□□□ 0.38
CTSD-202ENST00000367196 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
CTSD-202ENST00000367196 ARVCFO00192 962 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 ADCY6O43306 1168 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 SLC16A2P36021 539 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 SNAP25P60880 206 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 FAAP100Q0VG06 881 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 C9orf50Q5SZB4 431 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 GPATCH4Q5T3I0 446 aaKnown RBP17.42■□□□□ 0.38
CTSD-202ENST00000367196 IQSEC1Q6DN90 963 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 CWC27Q6UX04 472 aaKnown RBP17.42■□□□□ 0.38
CTSD-202ENST00000367196 RNPC3Q96LT9 517 aaKnown RBP17.42■□□□□ 0.38
CTSD-202ENST00000367196 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
CTSD-202ENST00000367196 TIMP1P01033 207 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 FSCN1Q16658 493 aaKnown RBP17.41■□□□□ 0.38
CTSD-202ENST00000367196 TTBK2Q6IQ55 1244 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 DGKHQ86XP1 1220 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 GPCPD1Q9NPB8 672 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 GNEQ9Y223 722 aaKnown RBP17.41■□□□□ 0.38
CTSD-202ENST00000367196 LCTP09848 1927 aa17.41■□□□□ 0.38
CTSD-202ENST00000367196 COL6A3P12111 3177 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 TMEM265A0A087WTH1 108 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.4■□□□□ 0.38
CTSD-202ENST00000367196 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 B4DLN1 442 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 ITGB8P26012 769 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 CDK7P50613 346 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 MRPL12P52815 198 aaKnown RBP17.4■□□□□ 0.38
CTSD-202ENST00000367196 PPIGQ13427 754 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTSD-202ENST00000367196 IMMTQ16891 758 aaKnown RBP17.4■□□□□ 0.38
CTSD-202ENST00000367196 FBXO16Q8IX29 292 aaPredicted RBP17.4■□□□□ 0.38
CTSD-202ENST00000367196 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 MORC4Q8TE76 937 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 DSCC1Q9BVC3 393 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 TBX21Q9UL17 535 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 NEDD4P46934 1319 aa17.4■□□□□ 0.38
CTSD-202ENST00000367196 IGHDP01880 384 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 ALDH5A1P51649 535 aaPredicted RBP17.39■□□□□ 0.37
CTSD-202ENST00000367196 BAATQ14032 418 aaPredicted RBP17.39■□□□□ 0.37
CTSD-202ENST00000367196 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 TMEM199Q8N511 208 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 MAF1Q9H063 256 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 KAT14Q9H8E8 782 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 ASTN1O14525 1302 aa17.39■□□□□ 0.37
CTSD-202ENST00000367196 NFIBO00712 420 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 CTAGE5O15320 804 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 DYNC1LI2O43237 492 aaPredicted RBP17.38■□□□□ 0.37
CTSD-202ENST00000367196 SMPD1P17405 629 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 BEX3Q00994 111 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 MFSD5Q6N075 450 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 EEPD1Q7L9B9 569 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 KRT23Q9C075 422 aa17.38■□□□□ 0.37
CTSD-202ENST00000367196 RAD50Q92878 1312 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms