RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GCNAQ96QF7 691 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 NACC1Q96RE7 527 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 SLC8A2Q9UPR5 921 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 KRIT1O00522 736 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 BPIFB4P59827 614 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 PNOCQ13519 176 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 MORC3Q14149 939 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 EIF3CLB5ME19 914 aaKnown RBP17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 CLGNO14967 610 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 PPM1KQ8N3J5 372 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 EIF3CQ99613 913 aaKnown RBP17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 H7C0C1 242 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 ATF2P15336 505 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 GYG1P46976 350 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 ATP5OP48047 213 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 CCDC38Q502W7 563 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 MFAP3P55082 362 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 KCNK3O14649 394 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 CTNNA1P35221 906 aaKnown RBP17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 GOLGA8QA0A0J9YX86 632 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 GOLGA8OA6NCC3 632 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 GOLGA8NF8WBI6 632 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 RFX6Q8HWS3 928 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
NUCKS1-201ENST00000367142 HYOU1Q9Y4L1 999 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 SCG2P13521 617 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 CPSF3Q9UKF6 684 aaKnown RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 MYL7Q01449 175 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 PTK2Q05397 1052 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 CACTINQ8WUQ7 758 aaKnown RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 DDX41Q9UJV9 622 aaKnown RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 IQCB1Q15051 598 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 KLHL14Q9P2G3 628 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 MAD1L1Q9Y6D9 718 aa17.16■□□□□ 0.34
NUCKS1-201ENST00000367142 THAP12O43422 761 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ANXA13P27216 316 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 CCND2P30279 289 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 F8W8V4 182 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 COG7P83436 770 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 MMEL1Q495T6 779 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 RASSF4Q9H2L5 321 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 PCDHB4Q9Y5E5 795 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 XDHP47989 1333 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 FAM170AA1A519 330 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 PLEKHG3A1L390 1219 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 SEMA3EO15041 775 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ADAM9Q13443 819 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 UBN1Q9NPG3 1134 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ABCD1P33897 745 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 INPP1P49441 399 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 TMC4Q7Z404 712 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 LRGUKQ96M69 825 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 PHLDB3Q6NSJ2 640 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 SLC7A3Q8WY07 619 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 TRIM11Q96F44 468 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 AMNQ9BXJ7 453 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 CHL1O00533 1208 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 CHRNDQ07001 517 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 TSC1Q92574 1164 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ATP6V1E2Q96A05 226 aa17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
NUCKS1-201ENST00000367142 TTC4O95801 387 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 FANCBQ8NB91 859 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 TNKSO95271 1327 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 HNRNPDLO14979 420 aaKnown RBP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 KAZNQ674X7 775 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 OR8K1Q8NGG5 319 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 Q9H521 79 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 GPC4O75487 556 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms