RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD46-208ENST00000367042 CAPS2Q9BXY5 557 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 C4AP0C0L4 1744 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 C4BP0C0L5 1744 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 NDUFAB1O14561 156 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 KIAA0754O94854 1291 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 EEF1GP26641 437 aaKnown RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 TECP42680 631 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 GUCY2FP51841 1108 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 TFAP4Q01664 338 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 C8orf74Q6P047 294 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 WDR59Q6PJI9 974 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 ADSSL1Q8N142 457 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 CRNKL1Q9BZJ0 848 aaKnown RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 BTG4Q9NY30 223 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 CAPN11Q9UMQ6 739 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 PAPPAQ13219 1627 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 MYO5AQ9Y4I1 1855 aaKnown RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 ESYT3A0FGR9 886 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 ERLIN2O94905 339 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 PLCG1P19174 1290 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 CABP7Q86V35 215 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 STAG2Q8N3U4 1231 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 NOC3LQ8WTT2 800 aaKnown RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 DMGDHQ9UI17 866 aaKnown RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 FAM205AQ6ZU69 1335 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 SPEF2Q9C093 1822 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 ATRNO75882 1429 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 RAD21O60216 631 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 MAGEA1P43355 309 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 NAPAP54920 295 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 IRX3P78415 501 aaPredicted RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 CCNI2Q6ZMN8 369 aaPredicted RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 DZIP1Q86YF9 867 aaKnown RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 IRF2BP1Q8IU81 584 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 FAM114A1Q8IWE2 563 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 RPGRIP1Q96KN7 1286 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 BICDL2A1A5D9 508 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 LRRC10BA6NIK2 292 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 DDAH1O94760 285 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 TXKP42681 527 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 ZBED6P86452 979 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 RASSF7Q02833 373 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 STK4Q13043 487 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 PDCLQ13371 301 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 HLTFQ14527 1009 aaKnown RBP eCLIP9.11□□□□□ -0.952e-6■■□□□ 13.6
CD46-208ENST00000367042 KCTD19Q17RG1 926 aaPredicted RBP9.11□□□□□ -0.95
CD46-208ENST00000367042 ANKRD40Q6AI12 368 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 SH2D3CQ8N5H7 860 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 TRIM58Q8NG06 486 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 P2RX5Q93086 422 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 FAM184BQ9ULE4 1060 aa9.11□□□□□ -0.95
CD46-208ENST00000367042 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 HPDP32754 393 aaPredicted RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 PFKFB3Q16875 520 aaPredicted RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 ICE2Q659A1 982 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TMC4Q7Z404 712 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 DYNLL2Q96FJ2 89 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 NUP58Q9BVL2 599 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 EFCC1Q9HA90 598 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
CD46-208ENST00000367042 USP17L3A6NCW0 530 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 USP17L4A6NCW7 530 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 OPA1O60313 960 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 EPS15P42566 896 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TRAPPC10P48553 1259 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 VAV2P52735 878 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 CORO7P57737 925 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 FUT2Q10981 343 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 USP17L1Q7RTZ2 530 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TADA2BQ86TJ2 420 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 AMOTL1Q8IY63 956 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 ZNF444Q8N0Y2 327 aaPredicted RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 MS4A14Q96JA4 679 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 DNAJC7Q99615 494 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 THAP9Q9H5L6 903 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 FAM169AQ9Y6X4 670 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 EXOC5O00471 708 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 PRDX5P30044 214 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 INPP5BP32019 993 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 KIF11P52732 1056 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 RCAN1P53805 252 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms