RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 BACH2Q9BYV9 841 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 DOT1LQ8TEK3 1739 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 C5P01031 1676 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 ENC1O14682 589 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 ITIH2P19823 946 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 OXCT1P55809 520 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 CRELD1Q96HD1 420 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 PCDHA4Q9UN74 947 aa10.28□□□□□ -0.76
H3F3A-201ENST00000366813 TTC21BQ7Z4L5 1316 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 PAGE1O75459 146 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 CEACAM5P06731 702 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 TSNAXIP1Q2TAA8 658 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 OGFOD2Q6N063 350 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 GTF2IRD1Q9UHL9 959 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 NFAT5O94916 1531 aa10.27□□□□□ -0.77
H3F3A-201ENST00000366813 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 FUT4P22083 530 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 DALRD3Q5D0E6 543 aaKnown RBP10.26□□□□□ -0.77
H3F3A-201ENST00000366813 ELMO3Q96BJ8 720 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 CACNA2D2Q9NY47 1150 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
H3F3A-201ENST00000366813 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
H3F3A-201ENST00000366813 FANCGO15287 622 aa10.25□□□□□ -0.77
H3F3A-201ENST00000366813 CD96P40200 585 aa10.25□□□□□ -0.77
H3F3A-201ENST00000366813 ZCRB1Q8TBF4 217 aaKnown RBP10.25□□□□□ -0.77
H3F3A-201ENST00000366813 LTV1Q96GA3 475 aaPredicted RBP10.25□□□□□ -0.77
H3F3A-201ENST00000366813 RC3H2Q9HBD1 1191 aaKnown RBP10.25□□□□□ -0.77
H3F3A-201ENST00000366813 U3KQE9 123 aa10.25□□□□□ -0.77
H3F3A-201ENST00000366813 KIF13BQ9NQT8 1826 aa10.25□□□□□ -0.77
H3F3A-201ENST00000366813 WFDC3Q8IUB2 231 aa10.24□□□□□ -0.77
H3F3A-201ENST00000366813 KCT2Q8NC54 265 aa10.24□□□□□ -0.77
H3F3A-201ENST00000366813 PLAGL2Q9UPG8 496 aa10.24□□□□□ -0.77
H3F3A-201ENST00000366813 TAF1LQ8IZX4 1826 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
H3F3A-201ENST00000366813 MEI1Q5TIA1 1274 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 TMEM87AQ8NBN3 555 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 LINC00116Q8NCU8 138 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 ZNF507Q8TCN5 953 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 HEXIM2Q96MH2 286 aaKnown RBP10.23□□□□□ -0.77
H3F3A-201ENST00000366813 MCOLN1Q9GZU1 580 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 SNX11Q9Y5W9 270 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 SBF1O95248 1867 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
H3F3A-201ENST00000366813 BRCA1P38398 1863 aaKnown RBP10.22□□□□□ -0.77
H3F3A-201ENST00000366813 PAPLNO95428 1278 aa10.22□□□□□ -0.77
H3F3A-201ENST00000366813 CHRNA5P30532 468 aa10.22□□□□□ -0.77
H3F3A-201ENST00000366813 TMF1P82094 1093 aa10.22□□□□□ -0.77
H3F3A-201ENST00000366813 MAP2K1Q02750 393 aaPredicted RBP10.22□□□□□ -0.77
H3F3A-201ENST00000366813 TAF1CQ15572 869 aaPredicted RBP10.22□□□□□ -0.77
H3F3A-201ENST00000366813 ANGEL2Q5VTE6 544 aaKnown RBP10.22□□□□□ -0.77
H3F3A-201ENST00000366813 SCARA3Q6AZY7 606 aa10.22□□□□□ -0.77
H3F3A-201ENST00000366813 ARFGEF1Q9Y6D6 1849 aa10.22□□□□□ -0.77
H3F3A-201ENST00000366813 NSD3Q9BZ95 1437 aa10.21□□□□□ -0.77
H3F3A-201ENST00000366813 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.78
H3F3A-201ENST00000366813 LMNB1P20700 586 aa10.21□□□□□ -0.78
H3F3A-201ENST00000366813 ST13P50502 369 aaKnown RBP10.21□□□□□ -0.78
H3F3A-201ENST00000366813 ZBTB37Q5TC79 503 aa10.21□□□□□ -0.78
H3F3A-201ENST00000366813 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.78
H3F3A-201ENST00000366813 ATG4DQ86TL0 474 aaPredicted RBP10.21□□□□□ -0.78
H3F3A-201ENST00000366813 NLGN1Q8N2Q7 840 aa10.21□□□□□ -0.78
H3F3A-201ENST00000366813 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.78
H3F3A-201ENST00000366813 MBNL3Q9NUK0 354 aaKnown RBP10.21□□□□□ -0.78
H3F3A-201ENST00000366813 PASKQ96RG2 1323 aa10.2□□□□□ -0.78
H3F3A-201ENST00000366813 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
H3F3A-201ENST00000366813 IGF2BP3O00425 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
H3F3A-201ENST00000366813 CELA3AP09093 270 aa10.2□□□□□ -0.78
H3F3A-201ENST00000366813 RING1Q06587 406 aa10.2□□□□□ -0.78
H3F3A-201ENST00000366813 ASB11Q8WXH4 323 aa10.2□□□□□ -0.78
H3F3A-201ENST00000366813 TTF2Q9UNY4 1162 aaKnown RBP10.2□□□□□ -0.78
H3F3A-201ENST00000366813 VIRMAQ69YN4 1812 aaKnown RBP10.2□□□□□ -0.78
H3F3A-201ENST00000366813 TTC21AQ8NDW8 1320 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 KDM6AO15550 1401 aaPredicted RBP10.19□□□□□ -0.78
H3F3A-201ENST00000366813 PRAMEF27A3QJZ7 478 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 SCAMP3O14828 347 aaKnown RBP10.19□□□□□ -0.78
H3F3A-201ENST00000366813 DEFB115Q30KQ5 88 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 FAM214BQ7L5A3 538 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 HDXQ7Z353 690 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 POU5F2Q8N7G0 328 aa10.19□□□□□ -0.78
H3F3A-201ENST00000366813 WDR33Q9C0J8 1336 aaKnown RBP10.19□□□□□ -0.78
H3F3A-201ENST00000366813 NTF4P34130 210 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 SOX10P56693 466 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 FZD5Q13467 585 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 ITPK1Q13572 414 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 RASIP1Q5U651 963 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 SV2BQ7L1I2 683 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 UBE3DQ7Z6J8 389 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.18□□□□□ -0.78
H3F3A-201ENST00000366813 SMARCC1Q92922 1105 aaPredicted RBP10.18□□□□□ -0.78
H3F3A-201ENST00000366813 KRTAP9-9Q9BYP9 154 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 KRTAP9-4Q9BYQ2 154 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 TNKS2Q9H2K2 1166 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
H3F3A-201ENST00000366813 ADAMTS6Q9UKP5 1117 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 MEGF6O75095 1541 aa10.18□□□□□ -0.78
H3F3A-201ENST00000366813 RASSF10A6NK89 507 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 GYS1P13807 737 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 TCF3P15923 654 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms