RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ELOA2Q8IYF1 753 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 KLHL14Q9P2G3 628 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 PGRMC1O00264 195 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 KCNK3O14649 394 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 GOLGA4Q13439 2230 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 FAM26FQ5R3K3 315 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 MAGEA9P43362 315 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 PHLDB2Q86SQ0 1253 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 PROM2Q8N271 834 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 TXNDC16Q9P2K2 825 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 GCNT3O95395 438 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 PCK1P35558 622 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 OSBP2Q969R2 916 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 I3L4J1 428 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 KRT31Q15323 416 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPA-202ENST00000366764 TADA3O75528 432 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 MCUR1Q96AQ8 359 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 TACO1Q9BSH4 297 aaKnown RBP12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 LGALS16A8MUM7 142 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 KLRF2D3W0D1 207 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 EXOC3O60645 756 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 GPATCH4Q5T3I0 446 aaKnown RBP12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.34
CDC42BPA-202ENST00000366764 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 FAN1Q9Y2M0 1017 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 PHKA1P46020 1223 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 IQCB1Q15051 598 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 GBP7Q8N8V2 638 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 ATP1A3P13637 1013 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCNE1P24864 410 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 VSIG1Q86XK7 387 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 BIRC3Q13489 604 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 PSMB7Q99436 277 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 H7C1W4 665 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 UFL1O94874 794 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 SLMAPQ14BN4 828 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 SNCBQ16143 134 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 MYH8P13535 1937 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 STAMQ92783 540 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 HIP1RO75146 1068 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
CDC42BPA-202ENST00000366764 VIPAS39Q9H9C1 493 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 SUN1O94901 812 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 GAP43P17677 238 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 LMNB2Q03252 620 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■■■■ 54.4
CDC42BPA-202ENST00000366764 MRFAP1Q9Y605 127 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC197Q8NCU1 140 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 PANK4Q9NVE7 773 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 PHBP35232 272 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 TECPR2O15040 1411 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 AGLP35573 1532 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCT5P48643 541 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 NEDD9Q14511 834 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 DISC1Q9NRI5 854 aa12.94□□□□□ -0.34
CDC42BPA-202ENST00000366764 EXOC3L4Q17RC7 722 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 MYCT1Q8N699 235 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 IRX4P78413 519 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 RNASE9P60153 205 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 GDAP1L1Q96MZ0 367 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 VCX3BQ9H321 246 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms