RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZKSCAN3Q9BRR0 538 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 LRRC37A2A6NM11 1700 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CTAGE5O15320 804 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ACLYP53396 1101 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GJA9P57773 515 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 IRX5P78411 483 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 LRCH3Q96II8 777 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PDLIM7Q9NR12 457 aa16.07■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TRIM43BA6NCK2 446 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ASB14A6NK59 587 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 B4E1Z4 1266 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CHMLP26374 656 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 KCNA10Q16322 511 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GPATCH4Q5T3I0 446 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TRIM43Q96BQ3 446 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PURBQ96QR8 312 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GNEQ9Y223 722 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 RAD50Q92878 1312 aa16.06■□□□□ 0.16
TNFRSF1A-202ENST00000366159 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 NFIBO00712 420 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TLE2Q04725 743 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 BAATQ14032 418 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TAPT1Q6NXT6 567 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ANKRD33Q7Z3H0 272 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PNMA1Q8ND90 353 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
TNFRSF1A-202ENST00000366159 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CDK7P50613 346 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 KRT23Q9C075 422 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TNKSO95271 1327 aa16.04■□□□□ 0.16
TNFRSF1A-202ENST00000366159 COL6A3P12111 3177 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 GOLGA8HP0CJ92 632 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ITGB8P26012 769 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TNFAIP2Q03169 654 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PTH1RQ03431 593 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 SEC23AQ15436 765 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 UBA5Q9GZZ9 404 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CNNM2Q9H8M5 875 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ELP1O95163 1332 aa16.03■□□□□ 0.16
TNFRSF1A-202ENST00000366159 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 SGSM2O43147 1006 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 ASGR1P07306 291 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CYP21A2P08686 494 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 SMPD1P17405 629 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 IQSEC1Q6DN90 963 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CYB5R4Q7L1T6 521 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PCSK9Q8NBP7 692 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MAF1Q9H063 256 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 KAT14Q9H8E8 782 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 STARD7Q9NQZ5 370 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 PRKAG2Q9UGJ0 569 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 Q9Y3F1 56 aa16.02■□□□□ 0.16
TNFRSF1A-202ENST00000366159 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 CLTBP09497 229 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 EDNRBP24530 442 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ALDH5A1P51649 535 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ASPRV1Q53RT3 343 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 GNASQ5JWF2 1037 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ADGRF4Q8IZF3 695 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 RUFY2Q8WXA3 655 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 BADQ92934 168 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 VTA1Q9NP79 307 aa16.01■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PTGS1P23219 599 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 RPS6P62753 249 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 RNF207Q6ZRF8 634 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 FBXO16Q8IX29 292 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms