RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PDE4BQ07343 736 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 CACNB2Q08289 660 aaPredicted RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 FSTL1Q12841 308 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 TRIM26Q12899 539 aaPredicted RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 NMIQ13287 307 aaPredicted RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 SLC9A5Q14940 896 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 COLEC12Q5KU26 742 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 WIPI1Q5MNZ9 446 aaPredicted RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 DIEXFQ68CQ4 756 aaKnown RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 ADGRG3Q86Y34 549 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 JAMLQ86YT9 394 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 AEBP1Q8IUX7 1158 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 ULK2Q8IYT8 1036 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 FIBCD1Q8N539 461 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 DNAJC5GQ8N7S2 189 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF366Q8N895 744 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 LINC00116Q8NCU8 138 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 CCDC74AQ96AQ1 378 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 TSPAN17Q96FV3 270 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 FAM89AQ96GI7 184 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 TMEM87BQ96K49 555 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 NOX5Q96PH1 765 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 ADGRE3Q9BY15 652 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 KRTAP2-2Q9BYT5 123 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 VPS33BQ9H267 617 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 AURKAIP1Q9NWT8 199 aaPredicted RBP1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNHIT2Q9UHR6 403 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 CYP8B1Q9UNU6 501 aa1.01□□□□□ -2.25
RNU6-54P-201ENST00000365563 SHISA3A0PJX4 238 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZAR1LA6NP61 321 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 CYSRT1A8MQ03 144 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 CYP7B1O75881 506 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 PGRP06401 933 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 C1SP09871 688 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 ACRV1P26436 265 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 YARSP54577 528 aaKnown RBP1□□□□□ -2.25
RNU6-54P-201ENST00000365563 RNF4P78317 190 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 DGCR2P98153 550 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 COL10A1Q03692 680 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 ELOAQ14241 798 aaKnown RBP1□□□□□ -2.25
RNU6-54P-201ENST00000365563 INPP5AQ14642 412 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 KIR3DS1Q14943 382 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 BBS9Q3SYG4 887 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 PRAMEF18Q5VWM3 479 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 LAIR1Q6GTX8 287 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 PKN3Q6P5Z2 889 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 HDGFL2Q7Z4V5 671 aaPredicted RBP1□□□□□ -2.25
RNU6-54P-201ENST00000365563 KBTBD2Q8IY47 623 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 USHBP1Q8N6Y0 703 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 NAT16Q8N8M0 369 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 KYQ8NBH2 561 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 GIMAP8Q8ND71 665 aaPredicted RBP1□□□□□ -2.25
RNU6-54P-201ENST00000365563 SCARB1Q8WTV0 552 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 NELL1Q92832 810 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 EXTL1Q92935 676 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 CLIP3Q96DZ5 547 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 TCTN2Q96GX1 697 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 CDADC1Q9BWV3 514 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 HDAC8Q9BY41 377 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 TMEM168Q9H0V1 697 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 MEGF9Q9H1U4 602 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 ANTXR1Q9H6X2 564 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 L2HGDHQ9H9P8 463 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 SEC61A2Q9H9S3 476 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 PDLIM7Q9NR12 457 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 TJP2Q9UDY2 1190 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 ADAM30Q9UKF2 790 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 AKAP2Q9Y2D5 859 aa1□□□□□ -2.25
RNU6-54P-201ENST00000365563 DDX3XO00571 662 aaKnown RBP eCLIP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZBTB7AO95365 584 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 PEX11BO96011 259 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 LMNB1P20700 586 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 CORO7P57737 925 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 KRTAP27-1Q3LI81 207 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 KLHL22Q53GT1 634 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 USPL1Q5W0Q7 1092 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 ATG9BQ674R7 924 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 CRELD2Q6UXH1 353 aaPredicted RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 GAREM2Q75VX8 874 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF627Q7L945 461 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 USP48Q86UV5 1035 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZC3H18Q86VM9 953 aaKnown RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 MCATQ8IVS2 390 aaKnown RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 RGS22Q8NE09 1264 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 GRIN3AQ8TCU5 1115 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 CLP1Q92989 425 aaKnown RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 PEX11GQ96HA9 241 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 KREMEN1Q96MU8 473 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 BBC3Q96PG8 261 aaPredicted RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 C11orf84Q9BUA3 381 aaPredicted RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 BARX1Q9HBU1 254 aaPredicted RBP0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 ERVK13-1Q9NX77 482 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 SEPT3Q9UH03 358 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 PPM1HQ9ULR3 514 aa0.99□□□□□ -2.25
RNU6-54P-201ENST00000365563 FOXS1O43638 330 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 LRRN2O75325 713 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF205O95201 554 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 GCP02774 474 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 UBTFP17480 764 aaKnown RBP0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 BMP6P22004 513 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms