RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 TLK2Q86UE8 772 aa10.77□□□□□ -0.69
SNORA55-201ENST00000364587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNORA55-201ENST00000364587 C17orf80Q9BSJ5 609 aa10.77□□□□□ -0.69
SNORA55-201ENST00000364587 NSUN3Q9H649 340 aaKnown RBP10.77□□□□□ -0.69
SNORA55-201ENST00000364587 ZNF214Q9UL59 606 aaPredicted RBP10.77□□□□□ -0.69
SNORA55-201ENST00000364587 PA2G4Q9UQ80 394 aaKnown RBP10.77□□□□□ -0.69
SNORA55-201ENST00000364587 GNEQ9Y223 722 aaKnown RBP10.77□□□□□ -0.69
SNORA55-201ENST00000364587 PKD1L2Q7Z442 2459 aa10.77□□□□□ -0.69
SNORA55-201ENST00000364587 WDR46O15213 610 aaKnown RBP10.76□□□□□ -0.69
SNORA55-201ENST00000364587 DYNLL1P63167 89 aaKnown RBP10.76□□□□□ -0.69
SNORA55-201ENST00000364587 DEFB103AP81534 67 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 BFSP2Q13515 415 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 COL9A2Q14055 689 aaPredicted RBP10.76□□□□□ -0.69
SNORA55-201ENST00000364587 PUM1Q14671 1186 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNORA55-201ENST00000364587 MCTP2Q6DN12 878 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 FRMD5Q7Z6J6 570 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 CCDC144CPQ8IYA2 1237 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 ASIC4Q96FT7 647 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 VCPKMTQ9H867 229 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 TET1Q8NFU7 2136 aa10.76□□□□□ -0.69
SNORA55-201ENST00000364587 SIP14410 1827 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 ARID4AP29374 1257 aaPredicted RBP10.75□□□□□ -0.69
SNORA55-201ENST00000364587 MCAMP43121 646 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 PLCD1P51178 756 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 DLX2Q07687 328 aaPredicted RBP10.75□□□□□ -0.69
SNORA55-201ENST00000364587 SMAD4Q13485 552 aaKnown RBP10.75□□□□□ -0.69
SNORA55-201ENST00000364587 LRRFIP1Q32MZ4 808 aaKnown RBP10.75□□□□□ -0.69
SNORA55-201ENST00000364587 REPS2Q8NFH8 660 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 SH2D4AQ9H788 454 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 TMX2Q9Y320 296 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 GVINP1Q7Z2Y8 2422 aa10.75□□□□□ -0.69
SNORA55-201ENST00000364587 COL11A1P12107 1806 aaPredicted RBP10.74□□□□□ -0.69
SNORA55-201ENST00000364587 NCOR2Q9Y618 2525 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 H3BNC9 293 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 SLC4A3P48751 1232 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
SNORA55-201ENST00000364587 GPM6BQ13491 265 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 CTC1Q2NKJ3 1217 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 EPC2Q52LR7 807 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
SNORA55-201ENST00000364587 FAM117BQ6P1L5 589 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 ANKRD35Q8N283 1001 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 FGD4Q96M96 766 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 SAMD11Q96NU1 681 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 TEX13BQ9BXU2 312 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 PPP1R9AQ9ULJ8 1098 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 Q9Y3F1 56 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 RIPK3Q9Y572 518 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 MYH1P12882 1939 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 PTPRSQ13332 1948 aa10.74□□□□□ -0.69
SNORA55-201ENST00000364587 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 ABHD14A-ACY1A0A1B0GW23 586 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 UQCRFS1P1P0C7P4 283 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 SMPD1P17405 629 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 TFCP2Q12800 502 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 ST3GAL2Q16842 350 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 FAM47CQ5HY64 1035 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 CNKSR3Q6P9H4 555 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 COPRSQ9NQ92 184 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 MCM3APO60318 1980 aa10.73□□□□□ -0.69
SNORA55-201ENST00000364587 ACACBO00763 2458 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 ATRXP46100 2492 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 LOC730098B7Z3J9 87 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 EFCAB14O75071 495 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 POLR3DP05423 398 aaPredicted RBP10.72□□□□□ -0.69
SNORA55-201ENST00000364587 CYP7A1P22680 504 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 PTGS1P23219 599 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 CBX2Q14781 532 aaPredicted RBP10.72□□□□□ -0.69
SNORA55-201ENST00000364587 IQSEC1Q6DN90 963 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 CERS3Q8IU89 383 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 RIPOR3Q96MK2 946 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
SNORA55-201ENST00000364587 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 NOD1Q9Y239 953 aa10.72□□□□□ -0.69
SNORA55-201ENST00000364587 IGSF3O75054 1194 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 ICA1Q05084 483 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 GABPAQ06546 454 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 MYO7AQ13402 2215 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 IKBKEQ14164 716 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 GPNMBQ14956 572 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 MIGA1Q8NAN2 632 aa10.71□□□□□ -0.69
SNORA55-201ENST00000364587 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
SNORA55-201ENST00000364587 ASB14A6NK59 587 aa10.7□□□□□ -0.7
SNORA55-201ENST00000364587 RAD21O60216 631 aa10.7□□□□□ -0.7
SNORA55-201ENST00000364587 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
SNORA55-201ENST00000364587 PDGFBP01127 241 aaPredicted RBP10.7□□□□□ -0.7
SNORA55-201ENST00000364587 MYL3P08590 195 aa10.7□□□□□ -0.7
SNORA55-201ENST00000364587 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
SNORA55-201ENST00000364587 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
SNORA55-201ENST00000364587 HYAL1Q12794 435 aa10.7□□□□□ -0.7
SNORA55-201ENST00000364587 NFRKBQ6P4R8 1299 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms