RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CALM2P0DP24 149 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CALM3P0DP25 149 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PDIA3P30101 505 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 LRMPQ12912 555 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 TMCO4Q5TGY1 634 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 AFAP1L1Q8TED9 768 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CKAP4Q07065 602 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 MIGA2Q7L4E1 593 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PARD3BQ8TEW8 1205 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PAGR1Q9BTK6 254 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CAPN15O75808 1086 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 KCNJ6P48051 423 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 LMNTD2Q8IXW0 634 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 ANKRD7Q92527 254 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PCDHA7Q9UN72 937 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 TMA7Q9Y2S6 64 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 ZRANB2O95218 330 aaKnown RBP eCLIP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PRPHP41219 470 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 CACNB3P54284 484 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 PHC3Q8NDX5 983 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 SEC62Q99442 399 aaKnown RBP10.98□□□□□ -0.65
SIN3A-201ENST00000360439 ZNF711Q9Y462 761 aa10.98□□□□□ -0.65
SIN3A-201ENST00000360439 EFCAB8A8MWE9 144 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 B4DLN1 442 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 LSM1O15116 133 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 CTIFO43310 598 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 PNMA6AP0CW24 399 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 MARCKSP29966 332 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 XPO4Q9C0E2 1151 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 AS3MTQ9HBK9 375 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 HMGB1P1B2RPK0 211 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 CYP21A2P08686 494 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 VCAM1P19320 739 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 EPS15P42566 896 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 CACTINQ8WUQ7 758 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 EXOC4Q96A65 974 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 FUCA2Q9BTY2 467 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 HOMER2Q9NSB8 354 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 ABCC12Q96J65 1359 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 DLG5Q8TDM6 1919 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 CTAGE9A4FU28 777 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 RASGRF1Q13972 1273 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 MUM1L1Q5H9M0 696 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 B4GALNT4Q76KP1 1039 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 KCNH3Q9ULD8 1083 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 SPDYE3A6NKU9 549 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 AKR1B15C9JRZ8 316 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 HNRNPH1P31943 449 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 VPS41P49754 854 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 PPP2R3AQ06190 1150 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 RBM43Q6ZSC3 357 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 SIX5Q8N196 739 aa10.97□□□□□ -0.65
SIN3A-201ENST00000360439 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 NUP88Q99567 741 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
SIN3A-201ENST00000360439 CETN3O15182 167 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 DYNLL1P63167 89 aaKnown RBP10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CRYMQ14894 314 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 SH2D4BQ5SQS7 431 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 C11orf57Q6ZUT1 292 aaPredicted RBP10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CCDC26Q8TAB7 109 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CCDC51Q96ER9 411 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 PPP1R13BQ96KQ4 1090 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 RAB34Q9BZG1 259 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.65
SIN3A-201ENST00000360439 KCNF1Q9H3M0 494 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 NCOA5Q9HCD5 579 aaKnown RBP10.96□□□□□ -0.65
SIN3A-201ENST00000360439 ATP6V0A2Q9Y487 856 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CTAGE15A4D2H0 777 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 DEXIO95424 95 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CTAGE8P0CG41 777 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 PFKFB1P16118 471 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CUL3Q13618 768 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CTAGE6Q86UF2 777 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CTAGE4Q8IX94 777 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 CAMTA1Q9Y6Y1 1673 aa10.96□□□□□ -0.65
SIN3A-201ENST00000360439 NTSR2O95665 410 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 FGFR1OPO95684 399 aaKnown RBP10.96□□□□□ -0.66
SIN3A-201ENST00000360439 ARHGAP25P42331 645 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 PFDN4Q9NQP4 134 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 ZNRF3Q9ULT6 936 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 SLC8A1P32418 973 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 PPARAQ07869 468 aa10.96□□□□□ -0.66
SIN3A-201ENST00000360439 UHMK1Q8TAS1 419 aaKnown RBP10.96□□□□□ -0.66
SIN3A-201ENST00000360439 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms