RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 C1orf53Q5VUE5 145 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 SHCBP1Q8NEM2 672 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 ACER1Q8TDN7 264 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 BADQ92934 168 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 MOV10L1Q9BXT6 1211 aaKnown RBP7.68□□□□□ -1.18
CCDC196-201ENST00000359454 PRDM6Q9NQX0 595 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 SLC5A4Q9NY91 659 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 HOXC10Q9NYD6 342 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 LTBP2Q14767 1821 aa7.68□□□□□ -1.18
CCDC196-201ENST00000359454 ZNF236Q9UL36 1845 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 IDH1O75874 414 aaKnown RBP7.67□□□□□ -1.18
CCDC196-201ENST00000359454 FOSL2P15408 326 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 SHMT1P34896 483 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 ADCYAP1R1P41586 468 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 VASH1Q7L8A9 365 aaPredicted RBP7.67□□□□□ -1.18
CCDC196-201ENST00000359454 DHX37Q8IY37 1157 aaKnown RBP7.67□□□□□ -1.18
CCDC196-201ENST00000359454 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MAGEB6Q8N7X4 407 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MB21D1Q8N884 522 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MIGA1Q8NAN2 632 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MYLIPQ8WY64 445 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 SPATC1LQ9H0A9 340 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 TTYH1Q9H313 450 aaPredicted RBP7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MROH8Q9H579 483 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 PDLIM7Q9NR12 457 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 PKD2L1Q9P0L9 805 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
CCDC196-201ENST00000359454 RLFQ13129 1914 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TRIM43BA6NCK2 446 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 SIAH2O43255 324 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 COBLO75128 1261 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 SURF6O75683 361 aaKnown RBP7.66□□□□□ -1.18
CCDC196-201ENST00000359454 POLR3DP05423 398 aaPredicted RBP7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TRIM27P14373 513 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 ERCC3P19447 782 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 GUCY1A2P33402 732 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 ATP8B2P98198 1209 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TLE2Q04725 743 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 MAP3K12Q12852 859 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 SEPT2Q15019 361 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 LRRC41Q15345 812 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 SLFNL1Q499Z3 407 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 ANO1Q5XXA6 986 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 ABRAQ8N0Z2 381 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 SSH3Q8TE77 659 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TRIM43Q96BQ3 446 aaPredicted RBP7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 NRBP1Q9UHY1 535 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 DBNLQ9UJU6 430 aaKnown RBP7.66□□□□□ -1.18
CCDC196-201ENST00000359454 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 TACC3Q9Y6A5 838 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 MYH1P12882 1939 aa7.66□□□□□ -1.18
CCDC196-201ENST00000359454 A0A1W2PRG0 241 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 TNFRSF10AO00220 468 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 MPHOSPH10O00566 681 aaKnown RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 KIAA0355O15063 1070 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 CLTBP09497 229 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 PLCD1P51178 756 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 GABPAQ06546 454 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 PLS1Q14651 629 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 FAM47AQ5JRC9 791 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 PRAMEF19Q5SWL8 479 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 RNF180Q86T96 592 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 NCAPG2Q86XI2 1143 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 FRAT1Q92837 279 aaPredicted RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 FERMT2Q96AC1 680 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 MAML3Q96JK9 1138 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 RNPC3Q96LT9 517 aaKnown RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 CDK15Q96Q40 435 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 KCTD15Q96SI1 283 aaPredicted RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 ARID3AQ99856 593 aa7.65□□□□□ -1.18
CCDC196-201ENST00000359454 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 BCCIPQ9P287 314 aaKnown RBP eCLIP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 NOP58Q9Y2X3 529 aaKnown RBP7.65□□□□□ -1.18
CCDC196-201ENST00000359454 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 GDF9O60383 454 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 BCAR3O75815 825 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 FLOT1O75955 427 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 SLC25A27O95847 323 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 RARBP10826 455 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 FCER1AP12319 257 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 RAG1P15918 1043 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 FPGSQ05932 587 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 TMEM179Q6ZVK1 233 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 RNF135Q8IUD6 432 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 TMEM57Q8N5G2 664 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 SNIP1Q8TAD8 396 aaKnown RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 EAF2Q96CJ1 260 aaPredicted RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 UCN2Q96RP3 112 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 RIOK1Q9BRS2 568 aaKnown RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 CRNKL1Q9BZJ0 848 aaKnown RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 SH2D4AQ9H788 454 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 ARHGEF10LQ9HCE6 1279 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 XPNPEP3Q9NQH7 507 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 MCM9Q9NXL9 1143 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
CCDC196-201ENST00000359454 SWAP70Q9UH65 585 aa7.64□□□□□ -1.19
CCDC196-201ENST00000359454 TNNQ9UQP3 1299 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms