RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FEZ1Q99689 392 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 PTMAP06454 111 aaKnown RBP14.35□□□□□ -0.11
GGPS1-202ENST00000358966 BMP6P22004 513 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 TMEM179Q6ZVK1 233 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 CCNT1O60563 726 aaKnown RBP14.35□□□□□ -0.11
GGPS1-202ENST00000358966 GMPSP49915 693 aaPredicted RBP14.35□□□□□ -0.11
GGPS1-202ENST00000358966 USH1GQ495M9 461 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 SOGA3Q5TF21 947 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 TBCKQ8TEA7 893 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 UVSSAQ2YD98 709 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
GGPS1-202ENST00000358966 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 FAM151AQ8WW52 585 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 TSPYL1Q9H0U9 437 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 CALCOCO1Q9P1Z2 691 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 FAM237AA0A1B0GTK4 181 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 QRICH1Q2TAL8 776 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 ANO10Q9NW15 660 aa14.34□□□□□ -0.11
GGPS1-202ENST00000358966 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 TNNI2P48788 182 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 RASA3Q14644 834 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-202ENST00000358966 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 NYAP2Q9P242 653 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 ERICH4A6NGS2 130 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 BECN2A8MW95 431 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 EDIL3O43854 480 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
GGPS1-202ENST00000358966 TDP2O95551 362 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-202ENST00000358966 KARSQ15046 597 aaKnown RBP14.33□□□□□ -0.12
GGPS1-202ENST00000358966 POSTNQ15063 836 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 PTPN21Q16825 1174 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.12
GGPS1-202ENST00000358966 FEZ2Q9UHY8 353 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-202ENST00000358966 CDC37Q16543 378 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-202ENST00000358966 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-202ENST00000358966 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 DAGLBQ8NCG7 672 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 ZBTB21Q9ULJ3 1066 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 PNMA6FA0A0J9YX94 578 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 ZBTB5O15062 677 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 COBLO75128 1261 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 TNNT3P45378 269 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-202ENST00000358966 ADCY7P51828 1080 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
GGPS1-202ENST00000358966 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
GGPS1-202ENST00000358966 GOLGA6L19H0YKK7 550 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 MYO1BO43795 1136 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 SLC37A4O43826 429 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 NONOQ15233 471 aaKnown RBP eCLIP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 TERF2Q15554 542 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 LRRC15Q8TF66 581 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 MKL1Q969V6 931 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 EFCC1Q9HA90 598 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 GNA11P29992 359 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 TRAPPC10P48553 1259 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 FAM83BQ5T0W9 1011 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 ANKRD7Q92527 254 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 FERMT2Q96AC1 680 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 TUBE1Q9UJT0 475 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 PCDHA1Q9Y5I3 950 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
GGPS1-202ENST00000358966 CENPFP49454 3210 aa14.31□□□□□ -0.12
GGPS1-202ENST00000358966 NLRP12P59046 1061 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 TRMT44Q8IYL2 757 aaKnown RBP14.3□□□□□ -0.12
GGPS1-202ENST00000358966 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
GGPS1-202ENST00000358966 MTRQ99707 1265 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 FBXO28Q9NVF7 368 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 HERC5Q9UII4 1024 aaKnown RBP14.3□□□□□ -0.12
GGPS1-202ENST00000358966 MAN1B1Q9UKM7 699 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 MYH7BA7E2Y1 1941 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 ATP1A3P13637 1013 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 LMOD1P29536 600 aaPredicted RBP14.3□□□□□ -0.12
GGPS1-202ENST00000358966 NEK8Q86SG6 692 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms