RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 CTIFO43310 598 aaKnown RBP13.6□□□□□ -0.23
COL20A1-201ENST00000358894 TOB1P50616 345 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-201ENST00000358894 CETN1Q12798 172 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 PDE11AQ9HCR9 933 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 KLRK1P26718 216 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 CDK8P49336 464 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 RCAN1P53805 252 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 ST7Q9NRC1 585 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 BUB1O43683 1085 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 EEF1GP26641 437 aaKnown RBP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 GYS2P54840 703 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 STXBP4Q6ZWJ1 553 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 HS2ST1Q7LGA3 356 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NFAT5O94916 1531 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NDUFA10O95299 355 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 KCTD1Q719H9 257 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 HPSEQ9Y251 543 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 KLHL30Q0D2K2 578 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NCAPHQ15003 741 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 IFI16Q16666 785 aaKnown RBP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 ADGRA1Q86SQ6 560 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 GPBP1Q86WP2 473 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 ADGRG1Q9Y653 693 aa13.59□□□□□ -0.23
COL20A1-201ENST00000358894 FGFR2P21802 821 aa13.58□□□□□ -0.23
COL20A1-201ENST00000358894 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.23
COL20A1-201ENST00000358894 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.23
COL20A1-201ENST00000358894 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.23
COL20A1-201ENST00000358894 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.23
COL20A1-201ENST00000358894 PARP3Q9Y6F1 533 aa13.58□□□□□ -0.23
COL20A1-201ENST00000358894 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 UBE2SQ16763 222 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 PRR16Q569H4 304 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-201ENST00000358894 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
COL20A1-201ENST00000358894 SERPINB2P05120 415 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 CYP4A11Q02928 519 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 OTUD6BQ8N6M0 293 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 TC2NQ8N9U0 490 aa13.58□□□□□ -0.24
COL20A1-201ENST00000358894 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 CFBP00751 764 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 GRAPQ13588 217 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 GRAPLQ8TC17 118 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 DHTKD1Q96HY7 919 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 ABHD10Q9NUJ1 306 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 JRKLQ9Y4A0 524 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TCRBV5S4A2TA0A5A2 114 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 CCNE1P24864 410 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 DNM3Q9UQ16 869 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TROAPQ12815 778 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 LAD1O00515 517 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 RPL13P26373 211 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 POLR2FP61218 127 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 ASIC2Q16515 512 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 KLHL7Q8IXQ5 586 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 MB21D1Q8N884 522 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TBC1D5Q92609 795 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
COL20A1-201ENST00000358894 AK8Q96MA6 479 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 PANK4Q9NVE7 773 aa13.57□□□□□ -0.24
COL20A1-201ENST00000358894 TMEM110-MUSTN1A8MSY1 372 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 ORC4O43929 436 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 OPA1O60313 960 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms