RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 DZIP1Q86YF9 867 aaKnown RBP11.74□□□□□ -0.53
CTSE-201ENST00000358184 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 RSPH1Q8WYR4 309 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CLIP3Q96DZ5 547 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 OXCT2Q9BYC2 517 aaPredicted RBP11.74□□□□□ -0.53
CTSE-201ENST00000358184 KAT14Q9H8E8 782 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CROTQ9UKG9 612 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 C15orf41Q9Y2V0 281 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CHMP3Q9Y3E7 222 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 GOLGA6L7A0A1B0GV03 622 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 RFC4P35249 363 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CBX3Q13185 183 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 HOMER1Q86YM7 354 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 SLC15A3Q8IY34 581 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 TTC30BQ8N4P2 665 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 CTNNBL1Q8WYA6 563 aaPredicted RBP11.74□□□□□ -0.53
CTSE-201ENST00000358184 LZICQ8WZA0 190 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 PLA2G12BQ9BX93 195 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 HELLSQ9NRZ9 838 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 PCMTD2Q9NV79 361 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
CTSE-201ENST00000358184 TUBA8Q9NY65 449 aaPredicted RBP11.74□□□□□ -0.53
CTSE-201ENST00000358184 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 WDR35Q9P2L0 1181 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 ATXN10Q9UBB4 475 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
CTSE-201ENST00000358184 NUP98P52948 1817 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 MCM3P25205 808 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
CTSE-201ENST00000358184 ZNF165P49910 485 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 PSMD7P51665 324 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 GUCY1B3Q02153 619 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 RESTQ13127 1097 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
CTSE-201ENST00000358184 KRT32Q14532 448 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 NCCRP1Q6ZVX7 275 aaPredicted RBP11.73□□□□□ -0.53
CTSE-201ENST00000358184 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 USP33Q8TEY7 942 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 VIPAS39Q9H9C1 493 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
CTSE-201ENST00000358184 EXOC1Q9NV70 894 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
CTSE-201ENST00000358184 NIP7Q9Y221 180 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTSE-201ENST00000358184 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
CTSE-201ENST00000358184 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 GFPT2O94808 682 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 CNGA1P29973 690 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 COPB2P35606 906 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 FOXO4P98177 505 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 RCN1Q15293 331 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 EAF2Q96CJ1 260 aaPredicted RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 NUP58Q9BVL2 599 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 ACTR5Q9H9F9 607 aaPredicted RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 QPCTLQ9NXS2 382 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 TMCO1Q9UM00 188 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 CBFA2T2O43439 604 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 ATP9BO43861 1147 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 NR1I2O75469 434 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 IDO1P14902 403 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 PPFIA1Q13136 1202 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 MSANTD4Q8NCY6 345 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 OSBPL10Q9BXB5 764 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
CTSE-201ENST00000358184 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
CTSE-201ENST00000358184 OXCT1P55809 520 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 SUSD4Q5VX71 490 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 IWS1Q96ST2 819 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 SH3GL1Q99961 368 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 ABCB6Q9NP58 842 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 ANO10Q9NW15 660 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 RFX7Q2KHR2 1363 aa11.71□□□□□ -0.53
CTSE-201ENST00000358184 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms