RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 STXBP3O00186 592 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 SLC25A27O95847 323 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 GJB2P29033 226 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 CCNA1P78396 465 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
CCNE1-202ENST00000357943 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 ABCB11O95342 1321 aa17.15■□□□□ 0.34
CCNE1-202ENST00000357943 GPR25O00155 361 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 NFIBO00712 420 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 OPLAHO14841 1288 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 SP3Q02447 781 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 WDR78Q5VTH9 848 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 HTTP42858 3142 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 CTGFP29279 349 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 NAPAP54920 295 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 TKFCQ3LXA3 575 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 ZNF713Q8N859 430 aaPredicted RBP17.14■□□□□ 0.33
CCNE1-202ENST00000357943 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
CCNE1-202ENST00000357943 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
CCNE1-202ENST00000357943 MYH6P13533 1939 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
CCNE1-202ENST00000357943 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
CCNE1-202ENST00000357943 CAP1Q01518 475 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
CCNE1-202ENST00000357943 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 WASF1Q92558 559 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 TBC1D5Q92609 795 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 ARHGAP39Q9C0H5 1083 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 MROH8Q9H579 483 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
CCNE1-202ENST00000357943 MAPK4P31152 587 aa17.12■□□□□ 0.33
CCNE1-202ENST00000357943 COPB2P35606 906 aa17.12■□□□□ 0.33
CCNE1-202ENST00000357943 FOSBP53539 338 aa17.12■□□□□ 0.33
CCNE1-202ENST00000357943 TRAF1Q13077 416 aa17.12■□□□□ 0.33
CCNE1-202ENST00000357943 GPR142Q7Z601 462 aa17.12■□□□□ 0.33
CCNE1-202ENST00000357943 ZNF296Q8WUU4 475 aaPredicted RBP17.12■□□□□ 0.33
CCNE1-202ENST00000357943 NOM1Q5C9Z4 860 aaKnown RBP17.11■□□□□ 0.33
CCNE1-202ENST00000357943 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
CCNE1-202ENST00000357943 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
CCNE1-202ENST00000357943 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
CCNE1-202ENST00000357943 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
CCNE1-202ENST00000357943 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
CCNE1-202ENST00000357943 SMCO2A6NFE2 343 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CFBP00751 764 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
CCNE1-202ENST00000357943 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
CCNE1-202ENST00000357943 PSMC4P43686 418 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 PPP1R18Q6NYC8 613 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CD99L2Q8TCZ2 262 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CCDC12Q8WUD4 166 aaPredicted RBP17.1■□□□□ 0.33
CCNE1-202ENST00000357943 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 ZMYND12Q9H0C1 365 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
CCNE1-202ENST00000357943 FOXN1O15353 648 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 FKTNO75072 461 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 SLC30A10Q6XR72 485 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CCDC148Q8NFR7 591 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 CYP39A1Q9NYL5 469 aa17.1■□□□□ 0.33
CCNE1-202ENST00000357943 MEIS2O14770 477 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
CCNE1-202ENST00000357943 FCER1AP12319 257 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 XBP1P17861 261 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 PTPREP23469 700 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-202ENST00000357943 NLRP5P59047 1200 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
CCNE1-202ENST00000357943 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-202ENST00000357943 KCTD2Q14681 263 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 NPY5RQ15761 445 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCNE1-202ENST00000357943 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 RGS22Q8NE09 1264 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 MMP19Q99542 508 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 IVNS1ABPQ9Y6Y0 642 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 BRCA2P51587 3418 aa17.09■□□□□ 0.33
CCNE1-202ENST00000357943 ESYT2A0FGR8 921 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 FCGRTP55899 365 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 GRB14Q14449 540 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 UBE2SQ16763 222 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms