RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PAX7P23759 505 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 NNTQ13423 1086 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 FAM170AA1A519 330 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 MFAP3LO75121 409 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 CYP27A1Q02318 531 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 TBC1D8BQ0IIM8 1120 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 SOGA3Q5TF21 947 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 SELENOSQ9BQE4 189 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.08□□□□□ -0.64
RNF40-202ENST00000357890 FAM217BQ9NTX9 383 aaPredicted RBP11.08□□□□□ -0.64
RNF40-202ENST00000357890 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
RNF40-202ENST00000357890 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 SIK1P57059 783 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 ASIC1P78348 528 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 ARID5AQ03989 594 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 GOLGA8KD6RF30 607 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 MAP2K7O14733 419 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 CALML3P27482 149 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
RNF40-202ENST00000357890 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.64
RNF40-202ENST00000357890 NR1I3Q14994 352 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 KRT31Q15323 416 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 OR8K1Q8NGG5 319 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 UBLCP1Q8WVY7 318 aaPredicted RBP11.08□□□□□ -0.64
RNF40-202ENST00000357890 KLC4Q9NSK0 619 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 INTS13Q9NVM9 706 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
RNF40-202ENST00000357890 SPATA31A6Q5VVP1 1343 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 ENO4A6NNW6 628 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 ZNF185O15231 689 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 KLHL7Q8IXQ5 586 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 ZHX3Q9H4I2 956 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 SPATS2LQ9NUQ6 558 aaKnown RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
RNF40-202ENST00000357890 RASGRP4Q8TDF6 673 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 CCDC51Q96ER9 411 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 A0A1B0GTH6 734 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 FAM237AA0A1B0GTK4 181 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 TMCO5BA8MYB1 307 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 PCP11498 1178 aaKnown RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 SEC24CP53992 1094 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 TRIM68Q6AZZ1 485 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 SUGP1Q8IWZ8 645 aaKnown RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 ELOA2Q8IYF1 753 aaPredicted RBP11.07□□□□□ -0.64
RNF40-202ENST00000357890 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.645e-7■■■■■ 43.5
RNF40-202ENST00000357890 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
RNF40-202ENST00000357890 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 ATP1A1P05023 1023 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 EPS15P42566 896 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 NLRP3Q96P20 1036 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 KCPQ6ZWJ8 1503 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 BAZ2BQ9UIF8 2168 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 ESYT3A0FGR9 886 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 RPN1P04843 607 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 USP14P54578 494 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 CUL4BQ13620 913 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 TRIM14Q14142 442 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 HNRNPLLQ8WVV9 542 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 KAT2BQ92831 832 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 HSD3B7Q9H2F3 369 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 GOLGA6L10A0A0M3HER8 536 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 ARFGAP2Q8N6H7 521 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 ENAHQ8N8S7 591 aaPredicted RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 SPDL1Q96EA4 605 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 STK38LQ9Y2H1 464 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
RNF40-202ENST00000357890 ATRNO75882 1429 aa11.06□□□□□ -0.64
RNF40-202ENST00000357890 EIF3HO15372 352 aaKnown RBP eCLIP11.05□□□□□ -0.644e-7■□□□□ 8.7
RNF40-202ENST00000357890 DDAH1O94760 285 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 GUCY2DQ02846 1103 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
RNF40-202ENST00000357890 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 TFCP2L1Q9NZI6 479 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
RNF40-202ENST00000357890 MEFVO15553 781 aaPredicted RBP11.05□□□□□ -0.64
RNF40-202ENST00000357890 SCG2P13521 617 aa11.05□□□□□ -0.64
RNF40-202ENST00000357890 CD44P16070 742 aaKnown RBP11.05□□□□□ -0.64
RNF40-202ENST00000357890 HIBADHP31937 336 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms