RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TTLL1O95922 423 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 GUCY1A2P33402 732 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 TXLNBQ8N3L3 684 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 KIFC2Q96AC6 838 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 IGKV6D-41A0A0C4DH26 115 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 CUTAO60888 179 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 DCPSQ96C86 337 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 FRMPD2Q68DX3 1309 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-202ENST00000357348 GREB1LQ9C091 1923 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 POTECB2RU33 542 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 CDKL5O76039 1030 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 DDAH1O94760 285 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 SEC31AO94979 1220 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 ZNF18P17022 549 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 CAPN2P17655 700 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 ICA1Q05084 483 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 CCDC178Q5BJE1 867 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 RABGGTAQ92696 567 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 TSPYL1Q9H0U9 437 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 FANCLQ9NW38 375 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 PSD3Q9NYI0 1048 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 ATAD5Q96QE3 1844 aa14.32□□□□□ -0.12
RTFDC1-202ENST00000357348 PLIN4Q96Q06 1357 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CASQ1P31415 396 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ECE1P42892 770 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 PNOCQ13519 176 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 NT5DC1Q5TFE4 455 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 TC2NQ8N9U0 490 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 BAG1Q99933 345 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CALM1P0DP23 149 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CALM2P0DP24 149 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CALM3P0DP25 149 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 BMP6P22004 513 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 INPP5BP32019 993 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 PPP2R3AQ06190 1150 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 SSRP1Q08945 709 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 KRT26Q7Z3Y9 468 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 SIAH1Q8IUQ4 282 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 WDR24Q96S15 920 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
RTFDC1-202ENST00000357348 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 CAP2P40123 477 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 KRT40Q6A162 431 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 FUT8Q9BYC5 575 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 GLIS2Q9BZE0 524 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 TAF1DQ9H5J8 278 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 RRAGCQ9HB90 399 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 PCDHA5Q9Y5H7 936 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 A0A1W2PRG0 241 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 TBC1D12O60347 775 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 IFNAR1P17181 557 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 OAS2P29728 719 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 SMC1AQ14683 1233 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 LONRF3Q496Y0 759 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 SPICE1Q8N0Z3 855 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 ENOX1Q8TC92 643 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 ACER1Q8TDN7 264 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 UBA5Q9GZZ9 404 aa14.3□□□□□ -0.12
RTFDC1-202ENST00000357348 MAP2K7O14733 419 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 PDHBP11177 359 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 NT5C2P49902 561 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 GOLGA8FQ08AF8 430 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 GOLGA8DPQ0D2H9 430 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 TMTC3Q6ZXV5 915 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 WRNIP1Q96S55 665 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms