RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 VPS16Q9H269 839 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 IFT122Q9HBG6 1241 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ZDHHC9Q9Y397 364 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF853P0CG23 659 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TFAP4Q01664 338 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 AOC3Q16853 763 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ODR4Q5SWX8 454 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 BEND3Q5T5X7 828 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 NXNQ6DKJ4 435 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 PPP1R2P3Q6NXS1 205 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SYT10Q6XYQ8 523 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 BBOF1Q8ND07 529 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SPDYE1Q8NFV5 336 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 CDKL2Q92772 493 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 DACT3Q96B18 629 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ANKRD36BP1Q96IX9 119 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 AMFRQ9UKV5 643 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 KIAA1210Q9ULL0 1709 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 USP32Q8NFA0 1604 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 MAP3K7O43318 606 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 NSFP46459 744 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGAP44Q17R89 818 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 EFCAB13Q8IY85 973 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 M0R2C6 588 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 RPS8P62241 208 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 NACC1Q96RE7 527 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 IFIH1Q9BYX4 1025 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 DDX25Q9UHL0 483 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TBX22Q9Y458 520 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SETBP1Q9Y6X0 1596 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TMEM232C9JQI7 657 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 GSPT1P15170 499 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 POSTNQ15063 836 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 PPP2R5EQ16537 467 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 FBXO11Q86XK2 927 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TRIM11Q96F44 468 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 LRRIQ4A6NIV6 560 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 FBLN1P23142 703 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 GBP7Q8N8V2 638 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 XDHP47989 1333 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PCK1P35558 622 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 POTEDQ86YR6 584 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 APOL6Q9BWW8 343 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 TAB2Q9NYJ8 693 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ERCC3P19447 782 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ANKRD20A3Q5VUR7 823 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 RILPQ96NA2 401 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 RUNDC3BQ96NL0 473 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 SYNJ2BP-COX16A0A087WUM0 186 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ADCY8P40145 1251 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ECE1P42892 770 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 EVCP57679 992 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 MYO1EQ12965 1108 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PLA2G4DQ86XP0 818 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 KLHL7Q8IXQ5 586 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 MYOCDQ8IZQ8 938 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 CACTINQ8WUQ7 758 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 RASSF4Q9H2L5 321 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 UBN1Q9NPG3 1134 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 COX16Q9P0S2 106 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 SLAIN2Q9P270 581 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 IQGAP1P46940 1657 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PREX2Q70Z35 1606 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 FOSP01100 380 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 RXRBP28702 533 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 INPP1P49441 399 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 KPNA2P52292 529 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 BPIFB4P59827 614 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 TTC31Q49AM3 519 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 KRT40Q6A162 431 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 FASTKD5Q7L8L6 764 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF594Q96JF6 807 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 FRMPD2Q68DX3 1309 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PLEKHG3A1L390 1219 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 hCG_1984214I3L0E3 225 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 POLR2DO15514 142 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 SCNN1DP51172 638 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 COG7P83436 770 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ASPHQ12797 758 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 SARM1Q6SZW1 724 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF713Q8N859 430 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PRPF38AQ8NAV1 312 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 MAGEF1Q9HAY2 307 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 PNMA3Q9UL41 463 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 MAP3K19Q56UN5 1328 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 GTF2A1P52655 376 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 NLRP12P59046 1061 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 RNASE9P60153 205 aaKnown RBP6.05□□□□□ -1.44
PTPRD-202ENST00000356435 DBN1Q16643 649 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 NLRP7Q8WX94 980 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 ZBED2Q9BTP6 218 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 COL4A3BPQ9Y5P4 624 aa6.05□□□□□ -1.44
PTPRD-202ENST00000356435 STAT1P42224 750 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 POLA2Q14181 598 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms