RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 USP27XA6NNY8 438 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 DDX39AO00148 427 aaKnown RBP15.75■□□□□ 0.11
LSS-201ENST00000356396 ZBTB39O15060 712 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 NCAPHQ15003 741 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 ECM1Q16610 540 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 ANGEL2Q5VTE6 544 aaKnown RBP15.75■□□□□ 0.11
LSS-201ENST00000356396 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 ZBTB9Q96C00 473 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 MTFR1LQ9H019 292 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 HACL1Q9UJ83 578 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 LAMB1P07942 1786 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 CCT6AP40227 531 aaKnown RBP15.74■□□□□ 0.11
LSS-201ENST00000356396 PTGER2P43116 358 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 MDM2Q00987 491 aaPredicted RBP15.74■□□□□ 0.11
LSS-201ENST00000356396 UPF1Q92900 1129 aaKnown RBP eCLIP15.74■□□□□ 0.113e-17■■■■■ 38.2
LSS-201ENST00000356396 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 ATP2C1P98194 919 aaPredicted RBP15.74■□□□□ 0.11
LSS-201ENST00000356396 SMARCE1Q969G3 411 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 AGBL1Q96MI9 1066 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 TCP11L1Q9NUJ3 509 aa15.74■□□□□ 0.11
LSS-201ENST00000356396 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 M0R2N6 131 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 SERPINC1P01008 464 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 LRRC41Q15345 812 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 DTHD1Q6ZMT9 781 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 ZHX3Q9H4I2 956 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 FCER1AP12319 257 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 ADCY7P51828 1080 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.114e-8■■■■■ 32.2
LSS-201ENST00000356396 IDI2Q9BXS1 227 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
LSS-201ENST00000356396 PLCG1P19174 1290 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 UBA7P41226 1012 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 STAT6P42226 847 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 NLRP12P59046 1061 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 PRR16Q569H4 304 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 NAALADL2Q58DX5 795 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 RIOX1Q9H6W3 641 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 CTNND2Q9UQB3 1225 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 ZKSCAN5Q9Y2L8 839 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 NEMFO60524 1076 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 PMS1P54277 932 aaKnown RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 HDAC9Q9UKV0 1011 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 IDEP14735 1019 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 MKRN3Q13064 507 aaKnown RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 CCDC178Q5BJE1 867 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 ATL3Q6DD88 541 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 FAM177A1Q8N128 213 aaPredicted RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 ZNF592Q92610 1267 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 ANKS1AQ92625 1134 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
LSS-201ENST00000356396 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 DEFB129Q9H1M3 183 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 ZBTB21Q9ULJ3 1066 aa15.72■□□□□ 0.11
LSS-201ENST00000356396 NID2Q14112 1375 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 TEX33O43247 280 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 NEK8Q86SG6 692 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 PRR12Q9ULL5 1215 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 ZBTB5O15062 677 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 GNAQP50148 359 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 SP4Q02446 784 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 MCM6Q14566 821 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 RRAGBQ5VZM2 374 aa15.71■□□□□ 0.11
LSS-201ENST00000356396 BMP3P12645 472 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 SPP2Q13103 211 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 CALML3P27482 149 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
LSS-201ENST00000356396 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 TATDN1Q6P1N9 297 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
LSS-201ENST00000356396 ADKP55263 362 aaKnown RBP15.69■□□□□ 0.1
LSS-201ENST00000356396 FANCCQ00597 558 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 MTMR2Q13614 643 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 SUGT1Q9Y2Z0 365 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 MAST2Q6P0Q8 1798 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 MYH8P13535 1937 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 SFI1A8K8P3 1242 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 E9PMD0 336 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 OPLAHO14841 1288 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 TMEM179Q6ZVK1 233 aa15.69■□□□□ 0.1
LSS-201ENST00000356396 CCDC148Q8NFR7 591 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms