RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 CD99L2Q8TCZ2 262 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 SLC26A6Q9BXS9 759 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 PPP1R11O60927 126 aaPredicted RBP17.95■□□□□ 0.46
TRIM13-201ENST00000356017 KCTD2Q14681 263 aa17.95■□□□□ 0.46
TRIM13-201ENST00000356017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM13-201ENST00000356017 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
TRIM13-201ENST00000356017 TRIM47Q96LD4 638 aa17.95■□□□□ 0.46
TRIM13-201ENST00000356017 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 DEXIO95424 95 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 SCG2P13521 617 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 PFKFB3Q16875 520 aaPredicted RBP17.94■□□□□ 0.46
TRIM13-201ENST00000356017 MCF2L2Q86YR7 1114 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 COL11A1P12107 1806 aaPredicted RBP17.94■□□□□ 0.46
TRIM13-201ENST00000356017 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 SLC15A5A6NIM6 579 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 PTPREP23469 700 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 SOCS4Q8WXH5 440 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 WASF1Q92558 559 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 MMP19Q99542 508 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 ARHGAP39Q9C0H5 1083 aa17.94■□□□□ 0.46
TRIM13-201ENST00000356017 K7ELQ4 463 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-201ENST00000356017 CTDNEP1O95476 244 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 CTGFP29279 349 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 PRMT2P55345 433 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 SAMD3Q8N6K7 520 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
TRIM13-201ENST00000356017 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-201ENST00000356017 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 NUDT12Q9BQG2 462 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 PRDM10Q9NQV6 1147 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 SLC5A4Q9NY91 659 aa17.93■□□□□ 0.46
TRIM13-201ENST00000356017 MAP3K20Q9NYL2 800 aaKnown RBP17.93■□□□□ 0.46
TRIM13-201ENST00000356017 PFASO15067 1338 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 ECM2O94769 699 aaPredicted RBP17.92■□□□□ 0.46
TRIM13-201ENST00000356017 HMGN5P82970 282 aaKnown RBP17.92■□□□□ 0.46
TRIM13-201ENST00000356017 ST3GAL1Q11201 340 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 GRB14Q14449 540 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 PKN1Q16512 942 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 MUM1L1Q5H9M0 696 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
TRIM13-201ENST00000356017 ORC3Q9UBD5 711 aaPredicted RBP17.92■□□□□ 0.46
TRIM13-201ENST00000356017 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
TRIM13-201ENST00000356017 MORN1Q5T089 497 aa17.91■□□□□ 0.46
TRIM13-201ENST00000356017 WWC2Q6AWC2 1192 aa17.91■□□□□ 0.46
TRIM13-201ENST00000356017 NSMFQ6X4W1 530 aa17.91■□□□□ 0.46
TRIM13-201ENST00000356017 FAM177A1Q8N128 213 aaPredicted RBP17.91■□□□□ 0.46
TRIM13-201ENST00000356017 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
TRIM13-201ENST00000356017 SRRDQ9UH36 339 aa17.91■□□□□ 0.46
TRIM13-201ENST00000356017 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
TRIM13-201ENST00000356017 NFIBO00712 420 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 XBP1P17861 261 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 ADORA2AP29274 412 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 NAPAP54920 295 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 DPP9Q86TI2 863 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
TRIM13-201ENST00000356017 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 SH3GLB2Q9NR46 395 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 GJD2Q9UKL4 321 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 TRIM17Q9Y577 477 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 STXBP3O00186 592 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 TAL1P17542 331 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-201ENST00000356017 RGS2P41220 211 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 RNF207Q6ZRF8 634 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 OTOP1Q7RTM1 612 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 CYP39A1Q9NYL5 469 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 KIF3AQ9Y496 699 aa17.9■□□□□ 0.46
TRIM13-201ENST00000356017 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
TRIM13-201ENST00000356017 JAK2O60674 1132 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 FLT3LGP49771 235 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 CAP1Q01518 475 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 GHRHRQ02643 423 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 CUL4AQ13619 759 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
TRIM13-201ENST00000356017 CUL5Q93034 780 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 PSTPIP2Q9H939 334 aa17.89■□□□□ 0.45
TRIM13-201ENST00000356017 ESYT2A0FGR8 921 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 CFBP00751 764 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 HOXC6P09630 235 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 XRCC5P13010 732 aaKnown RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 GNA11P29992 359 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 MRPL12P52815 198 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms