RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 APBA1Q02410 837 aa12.74□□□□□ -0.37
CAPN9-202ENST00000354537 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
CAPN9-202ENST00000354537 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
CAPN9-202ENST00000354537 CAVIN3Q969G5 261 aa12.74□□□□□ -0.37
CAPN9-202ENST00000354537 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
CAPN9-202ENST00000354537 B4DLN1 442 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 EBAG9O00559 213 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 UBA7P41226 1012 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 GNAQP50148 359 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 EPHB4P54760 987 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
CAPN9-202ENST00000354537 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CAPZA3Q96KX2 299 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CCDC42Q96M95 316 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 C7orf25Q9BPX7 421 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 SLIT2O94813 1529 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 RCCD1A6NED2 376 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CHRNDQ07001 517 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 UBE4AQ14139 1066 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CAPS2Q9BXY5 557 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
CAPN9-202ENST00000354537 PJA2O43164 708 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 EVA1CP58658 441 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
CAPN9-202ENST00000354537 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 HYOU1Q9Y4L1 999 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 ITGB4P16144 1822 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 LAMB2P55268 1798 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
CAPN9-202ENST00000354537 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 EIF3HO15372 352 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAPN9-202ENST00000354537 MYBL2P10244 700 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 AMPD3Q01432 767 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
CAPN9-202ENST00000354537 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 SPATA4Q8NEY3 305 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 CNOT6LQ96LI5 555 aaKnown RBP12.72□□□□□ -0.37
CAPN9-202ENST00000354537 ALS2CR12Q96Q35 445 aa12.72□□□□□ -0.37
CAPN9-202ENST00000354537 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 SNAP23O00161 211 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 GTF2A1P52655 376 aaPredicted RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 MMS22LQ6ZRQ5 1243 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 NOC4LQ9BVI4 516 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 MTIF2P46199 727 aaKnown RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 C2orf54Q08AI8 447 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 BRINP3Q76B58 766 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 SND1Q7KZF4 910 aaKnown RBP eCLIP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
CAPN9-202ENST00000354537 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
CAPN9-202ENST00000354537 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
CAPN9-202ENST00000354537 SRRM3A6NNA2 597 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-202ENST00000354537 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 USP17L21D6R901 530 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 EXOC5O00471 708 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 ZNF185O15231 689 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 ZEB2O60315 1214 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 ANKRD40Q6AI12 368 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 B4GALNT4Q76KP1 1039 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 RASSF8Q8NHQ8 419 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-202ENST00000354537 OSBPL9Q96SU4 736 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
CAPN9-202ENST00000354537 TRIM9Q9C026 710 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 TCP11L1Q9NUJ3 509 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-202ENST00000354537 STIM2Q9P246 746 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 LRWD1Q9UFC0 647 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 HSF2BPO75031 334 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 DYNLL1P63167 89 aaKnown RBP12.7□□□□□ -0.38
CAPN9-202ENST00000354537 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
CAPN9-202ENST00000354537 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms