RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 TRIML1Q8N9V2 468 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 SRPRBQ9Y5M8 271 aaKnown RBP18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 CTSWP56202 376 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 NKX1-1Q15270 411 aaPredicted RBP18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 SLC5A9Q2M3M2 681 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 MIS18BP1Q6P0N0 1132 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 KDM7AQ6ZMT4 941 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 KIAA1328Q86T90 577 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 ZIM3Q96PE6 472 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 BATF3Q9NR55 127 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 E7EVH7 732 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 PSMD14O00487 310 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 STX17P56962 302 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 ANKRD20A8PQ5CZ79 823 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 CAGE1Q8TC20 777 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 NUP58Q9BVL2 599 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 YIPF3Q9GZM5 350 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 TRPC6Q9Y210 931 aa18.76■□□□□ 0.59
ARFGAP1-201ENST00000353546 IRS4O14654 1257 aaPredicted RBP18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 MGRN1O60291 552 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 FAM107AO95990 144 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 CCDC181Q5TID7 509 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 KANK3Q6NY19 840 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 NUP133Q8WUM0 1156 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 JAKMIP2Q96AA8 810 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 CYFIP2Q96F07 1278 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 KRT23Q9C075 422 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 hCG_1642624A0A1W2PR95 340 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 UQCRFS1P1P0C7P4 283 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 FECHP22830 423 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 ERCC5P28715 1186 aaPredicted RBP18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 AFMP43652 599 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 WTAPQ15007 396 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 GIGYF2Q6Y7W6 1299 aaKnown RBP18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 TMTC1Q8IUR5 882 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 CRACR2BQ8N4Y2 399 aaPredicted RBP18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 NOD2Q9HC29 1040 aa18.75■□□□□ 0.59
ARFGAP1-201ENST00000353546 KDM4FA0A1W2PPD8 638 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 DEXIO95424 95 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 SLC7A5Q01650 507 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 PAPD7Q5XG87 772 aaKnown RBP18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 CNGA4Q8IV77 575 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 ZNF513Q8N8E2 541 aaPredicted RBP18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 BAIAP2L1Q9UHR4 511 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 GGA2Q9UJY4 613 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 GSG1L2A8MUP6 293 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 BUB1BO60566 1050 aaPredicted RBP18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 HSF2BPO75031 334 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 SMNDC1O75940 238 aaKnown RBP eCLIP18.74■□□□□ 0.591e-7■■■□□ 16.1
ARFGAP1-201ENST00000353546 CASP1P29466 404 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 SCTRP47872 440 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 SPATA5Q8NB90 893 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 SPATA20Q8TB22 786 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 CHP1Q99653 195 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
ARFGAP1-201ENST00000353546 TNS2Q63HR2 1409 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 ATP6V1G2O95670 118 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 PYGLP06737 847 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 HOMEZQ8IX15 550 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 LRRC1Q9BTT6 524 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 PPANQ9NQ55 473 aaKnown RBP18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 HOMER3Q9NSC5 361 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 CEP131Q9UPN4 1083 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 CD44P16070 742 aaKnown RBP18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 MAP3K12Q12852 859 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 XRCC4Q13426 336 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 EPSTI1Q96J88 318 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 EBF2Q9HAK2 575 aa18.73■□□□□ 0.59
ARFGAP1-201ENST00000353546 A0A087X0B3 334 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 FAM205CA6NFA0 338 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 NR1D1P20393 614 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 MDH1P40925 334 aaKnown RBP18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 CKAP4Q07065 602 aaKnown RBP18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 SPATA1Q5VX52 437 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 ALS2CLQ60I27 953 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 SPAG5Q96R06 1193 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 ABHD10Q9NUJ1 306 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 L3MBTL1Q9Y468 752 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 ERICH2A1L162 156 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 PPARAQ07869 468 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 SMYD4Q8IYR2 804 aaPredicted RBP18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 FANCBQ8NB91 859 aa18.72■□□□□ 0.59
ARFGAP1-201ENST00000353546 ZNF233A6NK53 670 aa18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 PUM3Q15397 648 aaKnown RBP18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 DRAXINQ8NBI3 349 aaPredicted RBP18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 LPIN2Q92539 896 aa18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 C15orf41Q9Y2V0 281 aa18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 SYNRGQ9UMZ2 1314 aa18.71■□□□□ 0.59
ARFGAP1-201ENST00000353546 PRPHP41219 470 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms