RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
CD74-202ENST00000353334 PPP1R9BQ96SB3 815 aa15.43■□□□□ 0.06
CD74-202ENST00000353334 NUP88Q99567 741 aaPredicted RBP15.43■□□□□ 0.06
CD74-202ENST00000353334 SLC28A3Q9HAS3 691 aa15.43■□□□□ 0.06
CD74-202ENST00000353334 IL23AQ9NPF7 189 aa15.43■□□□□ 0.06
CD74-202ENST00000353334 RIPK3Q9Y572 518 aa15.43■□□□□ 0.06
CD74-202ENST00000353334 DNAJC25-GNG10A0A024R161 153 aa15.42■□□□□ 0.06
CD74-202ENST00000353334 MYOGP15173 224 aa15.42■□□□□ 0.06
CD74-202ENST00000353334 ZSCAN20P17040 1043 aaPredicted RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 MCM4P33991 863 aa15.42■□□□□ 0.06
CD74-202ENST00000353334 PDE1AP54750 535 aa15.42■□□□□ 0.06
CD74-202ENST00000353334 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 AXDND1Q5T1B0 1012 aaPredicted RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 SNRNP48Q6IEG0 339 aaKnown RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
CD74-202ENST00000353334 COPB2P35606 906 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 CDK8P49336 464 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 ACVR2BQ13705 512 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 GNASQ5JWF2 1037 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 OTOP2Q7RTS6 562 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 MSL3Q8N5Y2 521 aaKnown RBP15.41■□□□□ 0.06
CD74-202ENST00000353334 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
CD74-202ENST00000353334 DDX11Q96FC9 970 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 FGD4Q96M96 766 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 C1QTNF1Q9BXJ1 281 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 GOPCQ9HD26 462 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.41■□□□□ 0.06
CD74-202ENST00000353334 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
CD74-202ENST00000353334 GOLIM4O00461 696 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 CLGNO14967 610 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 CTAGE5O15320 804 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 TLR3O15455 904 aaKnown RBP15.4■□□□□ 0.06
CD74-202ENST00000353334 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
CD74-202ENST00000353334 MBD4O95243 580 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 CD4P01730 458 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 FGBP02675 491 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 GJA9P57773 515 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 BEX3Q00994 111 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 CCDC17Q96LX7 622 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 TEX13BQ9BXU2 312 aa15.4■□□□□ 0.06
CD74-202ENST00000353334 GREB1LQ9C091 1923 aaPredicted RBP15.39■□□□□ 0.05
CD74-202ENST00000353334 CCL23P55773 120 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
CD74-202ENST00000353334 C12orf60Q5U649 245 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 PPP2R2DQ66LE6 453 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 KIF1BPQ96EK5 621 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 ZFP91Q96JP5 570 aaPredicted RBP15.39■□□□□ 0.05
CD74-202ENST00000353334 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
CD74-202ENST00000353334 HIPK3Q9H422 1215 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 EPHX3Q9H6B9 360 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 SPC25Q9HBM1 224 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
CD74-202ENST00000353334 LRRC37A2A6NM11 1700 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 PRRC2BQ5JSZ5 2229 aaKnown RBP15.38■□□□□ 0.05
CD74-202ENST00000353334 PTGS1P23219 599 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 SKIV2LQ15477 1246 aaKnown RBP15.38■□□□□ 0.05
CD74-202ENST00000353334 SASS6Q6UVJ0 657 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 C16orf86Q6ZW13 317 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 ERC1Q8IUD2 1116 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 LRFN3Q9BTN0 628 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 WNT8AQ9H1J5 351 aa15.38■□□□□ 0.05
CD74-202ENST00000353334 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
CD74-202ENST00000353334 UQCRHLA0A096LP55 91 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 USP17L21D6R901 530 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 RFXAPO00287 272 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 TRAK2O60296 914 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 REC8O95072 547 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 CHGBP05060 677 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 UQCRHP07919 91 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 SDSP20132 328 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 MX1P20591 662 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 CXCL17Q6UXB2 119 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 ARMCX2Q7L311 632 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 ZNF467Q7Z7K2 595 aaPredicted RBP15.37■□□□□ 0.05
CD74-202ENST00000353334 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
CD74-202ENST00000353334 TRPV6Q9H1D0 765 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 ABHD16BQ9H3Z7 469 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 ASTN1O14525 1302 aa15.37■□□□□ 0.05
CD74-202ENST00000353334 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
CD74-202ENST00000353334 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
CD74-202ENST00000353334 KATNBL1Q9H079 304 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 RAVER2Q9HCJ3 691 aaKnown RBP15.36■□□□□ 0.05
CD74-202ENST00000353334 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 CHMP5Q9NZZ3 219 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 PCDHA11Q9Y5I1 949 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 SLC4A7Q9Y6M7 1214 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
CD74-202ENST00000353334 CCDC66A2RUB6 948 aa15.35■□□□□ 0.05
CD74-202ENST00000353334 AAK1Q2M2I8 961 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms