RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 RRAGAQ7L523 313 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 PPANQ9NQ55 473 aaKnown RBP12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 CYP27B1O15528 508 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 CEP104O60308 925 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 RHOXF2BP0C7M4 288 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 RHOXF2Q9BQY4 288 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 MAGEF1Q9HAY2 307 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 SLC16A2P36021 539 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 CEP170P1Q96L14 293 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
SLC6A20-201ENST00000353278 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 STAM2O75886 525 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 HAUS1Q96CS2 278 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 ADCY9O60503 1353 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PDE6CP51160 858 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 SARNPP82979 210 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 ZKSCAN5Q9Y2L8 839 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 COL15A1P39059 1388 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 MECOMQ03112 1051 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PTGDRQ13258 359 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 NLRP7Q8WX94 980 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 HOXC10Q9NYD6 342 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 GAP43P17677 238 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 XPAP23025 273 aaPredicted RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 CRKP46108 304 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 BPIFB4P59827 614 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 U2AF1L4Q8WU68 220 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 WRNIP1Q96S55 665 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
SLC6A20-201ENST00000353278 PFDN6O15212 129 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 RNF8O76064 485 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 ECE2O60344 883 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PFKFB1P16118 471 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 SETDB1Q15047 1291 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 APOA5Q6Q788 366 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 CCDC105Q8IYK2 499 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 GJA10Q969M2 543 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 CUEDC2Q9H467 287 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 TNS3Q68CZ2 1445 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 ELF1P32519 619 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 ADAM9Q13443 819 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 DAAM2Q86T65 1068 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 TRMT44Q8IYL2 757 aaKnown RBP12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PRPF31Q8WWY3 499 aaKnown RBP12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PIGSQ96S52 555 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 PSAPP07602 524 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 HSPA1LP34931 641 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 CROCCP2Q86T23 111 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
SLC6A20-201ENST00000353278 GH2P01242 217 aa12.32□□□□□ -0.44
SLC6A20-201ENST00000353278 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
SLC6A20-201ENST00000353278 CUL4BQ13620 913 aa12.32□□□□□ -0.44
SLC6A20-201ENST00000353278 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
SLC6A20-201ENST00000353278 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
SLC6A20-201ENST00000353278 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms