RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 C2orf54Q08AI8 447 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 SPRED3Q2MJR0 410 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 LONRF3Q496Y0 759 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 CMPK2Q5EBM0 449 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 RRP12Q5JTH9 1297 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 CCDC122Q5T0U0 273 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 CACNA2D4Q7Z3S7 1137 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKP1-202ENST00000352845 TBC1D5Q92609 795 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 PPANQ9NQ55 473 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 MAST3O60307 1309 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 COL18A1P39060 1754 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 CCT8L1PA6NM43 557 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 FOXP2O15409 715 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 TRIM37O94972 964 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 BIRC3Q13489 604 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 CDKAL1Q5VV42 579 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 CCDC43Q96MW1 224 aaKnown RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 CWC25Q9NXE8 425 aaPredicted RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 PDE2AO00408 941 aaPredicted RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 DIAPH2O60879 1101 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 MYL6BP14649 208 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 CASP7P55210 303 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 KIF23Q02241 960 aaPredicted RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 ARMC3Q5W041 872 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 ZNF526Q8TF50 670 aaPredicted RBP11.74□□□□□ -0.53
PKP1-202ENST00000352845 LRRC1Q9BTT6 524 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 ASB3Q9Y575 518 aa11.74□□□□□ -0.53
PKP1-202ENST00000352845 TPP2P29144 1249 aaPredicted RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 MXRA7P84157 204 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 SPAG1Q07617 926 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 APBB1IPQ7Z5R6 666 aaPredicted RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 LMNTD2Q8IXW0 634 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 AGAP11Q8TF27 550 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKP1-202ENST00000352845 WDR35Q9P2L0 1181 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 DMGDHQ9UI17 866 aaKnown RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 REXO2Q9Y3B8 237 aaKnown RBP11.73□□□□□ -0.53
PKP1-202ENST00000352845 C4AP0C0L4 1744 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 C4BP0C0L5 1744 aa11.73□□□□□ -0.53
PKP1-202ENST00000352845 M0R2C6 588 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CREB3O43889 395 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 KIF4AO95239 1232 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 ITIH4Q14624 930 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 DBN1Q16643 649 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 TMBIM4Q9HC24 238 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 JADE2Q9NQC1 790 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 SLC12A6Q9UHW9 1150 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 SNX12Q9UMY4 172 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CEP131Q9UPN4 1083 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CLTAP09496 248 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 IDEP14735 1019 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 TCP1P17987 556 aaKnown RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 PTPAQ15257 358 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 PNMA8AQ86V59 439 aaPredicted RBP11.72□□□□□ -0.53
PKP1-202ENST00000352845 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
PKP1-202ENST00000352845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.53
PKP1-202ENST00000352845 ARFGEF2Q9Y6D5 1785 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 LRRC10BA6NIK2 292 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 FLOT1O75955 427 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 KRT9P35527 623 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 ANKRD20A2Q5SQ80 823 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
PKP1-202ENST00000352845 ANKRD20A1Q5TYW2 823 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms