RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 IFT140Q96RY7 1462 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 NAT1P18440 290 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CHKAP35790 457 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 GALK2Q01415 458 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 TMEM132BQ14DG7 1078 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CCNG2Q16589 344 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PERM1Q5SV97 790 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PPP2R2DQ66LE6 453 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 AGMOQ6ZNB7 445 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PPP1R14CQ8TAE6 165 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 GEMIN8Q9NWZ8 242 aaKnown RBP6.65□□□□□ -1.34
RFC1-201ENST00000349703 REREQ9P2R6 1566 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 ZNF608Q9ULD9 1512 aaPredicted RBP6.65□□□□□ -1.34
RFC1-201ENST00000349703 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 TAF4O00268 1085 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 HSPA1AP0DMV8 641 aaKnown RBP6.65□□□□□ -1.35
RFC1-201ENST00000349703 HSPA1BP0DMV9 641 aaKnown RBP6.65□□□□□ -1.35
RFC1-201ENST00000349703 FGFR3P22607 806 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 L1CAMP32004 1257 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 YARSP54577 528 aaKnown RBP6.65□□□□□ -1.35
RFC1-201ENST00000349703 TSTA3Q13630 321 aaPredicted RBP6.65□□□□□ -1.35
RFC1-201ENST00000349703 GIMAP7Q8NHV1 300 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 MS4A4AQ96JQ5 239 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 SRCIN1Q9C0H9 1055 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 TNMDQ9H2S6 317 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 NR2E3Q9Y5X4 410 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 NLRP1Q9C000 1473 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 TRIM64A6NGJ6 449 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 TRIM64BA6NI03 449 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 KRT85P78386 507 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 ATP13A4Q4VNC1 1196 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 GSDMBQ8TAX9 411 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 BICD2Q8TD16 824 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 EPS8L3Q8TE67 593 aaKnown RBP6.65□□□□□ -1.35
RFC1-201ENST00000349703 RMDN2Q96LZ7 410 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 PNPLA8Q9NP80 782 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 SNTG2Q9NY99 539 aa6.65□□□□□ -1.35
RFC1-201ENST00000349703 A2MP01023 1474 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ERN1O75460 977 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 CFBP00751 764 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 POU2F2P09086 479 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 USP8P40818 1118 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 TMPOP42166 694 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 CISD2Q8N5K1 135 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 AFG1LQ8WV93 481 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 FERMT1Q9BQL6 677 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ZCWPW1Q9H0M4 648 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ZNF277Q9NRM2 450 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 SYNPO2Q9UMS6 1093 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 TRPM1Q7Z4N2 1603 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 A0A1W2PPL8 197 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 A6NJY4 79 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 PF4P02776 101 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 SLC7A5Q01650 507 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 RIN3Q8TB24 985 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 TTC12Q9H892 705 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 PRDM16Q9HAZ2 1276 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 SYNDIG1LA6NDD5 238 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 U2AF2P26368 475 aaKnown RBP eCLIP6.64□□□□□ -1.35
RFC1-201ENST00000349703 PIP4K2AP48426 406 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 WDR4P57081 412 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 TBC1D5Q92609 795 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 PMM1Q92871 262 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ZNF358Q9NW07 568 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ATP8A1Q9Y2Q0 1164 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 PCDHGB6Q9Y5F9 930 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 MAGI1Q96QZ7 1491 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 KDM5AP29375 1690 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 NUP153P49790 1475 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 VPS37CA5D8V6 355 aaPredicted RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 PRAMEF25A6NGN4 478 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 ZBED4O75132 1171 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 IFIT1P09914 478 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 BRAFP15056 766 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 NCAPHQ15003 741 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 HSP90B2PQ58FF3 399 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 PIK3R6Q5UE93 754 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 STAG1Q8WVM7 1258 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 AHCYL2Q96HN2 611 aaKnown RBP6.64□□□□□ -1.35
RFC1-201ENST00000349703 ADI1Q9BV57 179 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 KMT5AQ9NQR1 393 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 SACM1LQ9NTJ5 587 aa6.64□□□□□ -1.35
RFC1-201ENST00000349703 SYNJ2O15056 1496 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 HARSP12081 509 aaKnown RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 RAB6AP20340 208 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 DDIT3P35638 169 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 MRPS35P82673 323 aaKnown RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 PTPRNQ16849 979 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ZNF569Q5MCW4 686 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 JPH3Q8WXH2 748 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 SLC39A7Q92504 469 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 C16orf45Q96MC5 204 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 SENP6Q9GZR1 1112 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms