RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SLC22A31A6NKX4 558 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 MEIS3P2A8K0S8 358 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 CHURC1-FNTBB4DL54 471 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 ERCC5P28715 1186 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 HOXA10P31260 410 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 ZNF165P49910 485 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 TMEM132EQ6IEE7 984 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 ZHX1Q9UKY1 873 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 ZNRF3Q9ULT6 936 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 U3KQE9 123 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 KIF20BQ96Q89 1820 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 TOPAZ1Q8N9V7 1692 aa9.32□□□□□ -0.92
UBE2D3-204ENST00000349311 EVC2Q86UK5 1308 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 PPP2R1AP30153 589 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 CEBPAP49715 358 aaPredicted RBP9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 HMGN5P82970 282 aaKnown RBP9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 CDCP2Q5VXM1 449 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 INTS5Q6P9B9 1019 aaKnown RBP9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 C22orf34Q6ZV56 151 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 DNAJB8Q8NHS0 232 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 IPO4Q8TEX9 1081 aaKnown RBP9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 GPRASP2Q96D09 838 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 PDLIM2Q96JY6 352 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 MON2Q7Z3U7 1717 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
UBE2D3-204ENST00000349311 SPINK2P20155 84 aa9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 OXCT1P55809 520 aa9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 RBBP8NLQ8NC74 664 aaPredicted RBP9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 PANK3Q9H999 370 aa9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 TBX22Q9Y458 520 aa9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.3□□□□□ -0.92
UBE2D3-204ENST00000349311 AK9Q5TCS8 1911 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 COBLO75128 1261 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 BCAR3O75815 825 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 ZSCAN20P17040 1043 aaPredicted RBP9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 LTKP29376 864 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 TNNI2P48788 182 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 TAF7LQ5H9L4 462 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 LETMD1Q6P1Q0 360 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 GK5Q6ZS86 529 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 DTX1Q86Y01 620 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 FAM13CQ8NE31 585 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 MYRIPQ8NFW9 859 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 CYB5D2Q8WUJ1 264 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 DPH2Q9BQC3 489 aaPredicted RBP9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 CNNM2Q9H8M5 875 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 GMIPQ9P107 970 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 NAP1L2Q9ULW6 460 aaPredicted RBP9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 CEP131Q9UPN4 1083 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
UBE2D3-204ENST00000349311 METP08581 1390 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 CYP26A1O43174 497 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 YARSP54577 528 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 MIPEPQ99797 713 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 TINF2Q9BSI4 451 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 DDX49Q9Y6V7 483 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 NWD1Q149M9 1564 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 ATP7BP35670 1465 aa9.28□□□□□ -0.92
UBE2D3-204ENST00000349311 ANKRD36BQ8N2N9 1353 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 ZNF865P0CJ78 1059 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 LRP8Q14114 963 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 ATG4CQ96DT6 458 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 SEC16BQ96JE7 1060 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 TNKS2Q9H2K2 1166 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 FMN2Q9NZ56 1722 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 RGPD8O14715 1765 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-204ENST00000349311 NSD2O96028 1365 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 TNFRSF10CO14798 259 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 PRNPP04156 253 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 GTF2F1P35269 517 aaKnown RBP eCLIP9.26□□□□□ -0.937e-7■■■□□ 15.7
UBE2D3-204ENST00000349311 NUCB2P80303 420 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 OVOS1Q6IE37 1185 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 PANK1Q8TE04 598 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 TMEM40Q8WWA1 233 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 COX4I2Q96KJ9 171 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 PRAM1Q96QH2 718 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 CCSER2Q9H7U1 834 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 GTF2IRD1Q9UHL9 959 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 PLAGL2Q9UPG8 496 aa9.26□□□□□ -0.93
UBE2D3-204ENST00000349311 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 RGS13O14921 159 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 HYAL3O43820 417 aaPredicted RBP9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 IMPDH2P12268 514 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 ATF4P18848 351 aaPredicted RBP9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 GRIK1P39086 918 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 ARTNQ5T4W7 220 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 TAB3Q8N5C8 712 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms