RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
PTN-201ENST00000348225 PPP1R12BO60237 982 aaPredicted RBP21.24■□□□□ 0.99
PTN-201ENST00000348225 BACE1P56817 501 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 SPP2Q13103 211 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 UBE2SQ16763 222 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 SDF4Q9BRK5 362 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 KCNH3Q9ULD8 1083 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 MRVI1Q9Y6F6 885 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 SRCAPQ6ZRS2 3230 aa21.24■□□□□ 0.99
PTN-201ENST00000348225 CCNT1O60563 726 aaKnown RBP21.23■□□□□ 0.99
PTN-201ENST00000348225 NF2P35240 595 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 GRIN1Q05586 938 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 AP3B2Q13367 1082 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 CKAP2LQ8IYA6 745 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 SLF1Q9BQI6 1058 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 PHIPQ8WWQ0 1821 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 WDR90Q96KV7 1748 aa21.23■□□□□ 0.99
PTN-201ENST00000348225 C19orf81C9J6K1 198 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 USP2O75604 605 aaPredicted RBP21.22■□□□□ 0.99
PTN-201ENST00000348225 SASS6Q6UVJ0 657 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 C4orf32Q8N8J7 132 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 PRPF38AQ8NAV1 312 aaKnown RBP21.22■□□□□ 0.99
PTN-201ENST00000348225 NAP1L4Q99733 375 aaKnown RBP21.22■□□□□ 0.99
PTN-201ENST00000348225 FUCA2Q9BTY2 467 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 TAF1DQ9H5J8 278 aaPredicted RBP21.22■□□□□ 0.99
PTN-201ENST00000348225 FZD1Q9UP38 647 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 ZHX2Q9Y6X8 837 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 VWA3AA6NCI4 1184 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 NEMFO60524 1076 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 VCAM1P19320 739 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 PRPHP41219 470 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 MAP3K9P80192 1104 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 PRKG1Q13976 671 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 CCDC174Q6PII3 467 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
PTN-201ENST00000348225 TANGO6Q9C0B7 1094 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 FBXO28Q9NVF7 368 aa21.22■□□□□ 0.99
PTN-201ENST00000348225 LONP1P36776 959 aaKnown RBP21.21■□□□□ 0.99
PTN-201ENST00000348225 IREB2P48200 963 aaKnown RBP21.21■□□□□ 0.99
PTN-201ENST00000348225 SPECC1Q5M775 1068 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 DTHD1Q6ZMT9 781 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 C12orf42Q96LP6 360 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 RBSNQ9H1K0 784 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 CSADQ9Y600 493 aa21.21■□□□□ 0.99
PTN-201ENST00000348225 ABCB11O95342 1321 aa21.2■□□□□ 0.98
PTN-201ENST00000348225 FOSP01100 380 aaPredicted RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 TYRO3Q06418 890 aa21.2■□□□□ 0.98
PTN-201ENST00000348225 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 CDCA5Q96FF9 252 aa21.2■□□□□ 0.98
PTN-201ENST00000348225 RPAP3Q9H6T3 665 aaPredicted RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 HOOK1Q9UJC3 728 aaKnown RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 MRPL11Q9Y3B7 192 aaKnown RBP21.2■□□□□ 0.98
PTN-201ENST00000348225 USP17L15C9J2P7 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L13C9JLJ4 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L11C9JVI0 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L18D6R9N7 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L22D6RA61 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L17D6RBQ6 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L19D6RCP7 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L20D6RJB6 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 MEIS2O14770 477 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 OR52Z1P0C646 297 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 FDX1P10109 184 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L24Q0WX57 530 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 USP17L6PQ6QN14 398 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 CCDC34Q96HJ3 373 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 PYM1Q9BRP8 204 aaKnown RBP21.19■□□□□ 0.98
PTN-201ENST00000348225 PNMA2Q9UL42 364 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 OTOFQ9HC10 1997 aa21.19■□□□□ 0.98
PTN-201ENST00000348225 SPDYE3A6NKU9 549 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 PIK3CDO00329 1044 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 FLOT1O75955 427 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 VGLL4Q14135 290 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 PPP4R3AQ6IN85 833 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 ELOA2Q8IYF1 753 aaPredicted RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 CNNM3Q8NE01 707 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 SYMPKQ92797 1274 aaKnown RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 ANO3Q9BYT9 981 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 TMEM60Q9H2L4 133 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 TMOD4Q9NZQ9 345 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 PPP1R9AQ9ULJ8 1098 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 SNCAIPQ9Y6H5 919 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 ICAM1P05362 532 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 XRCC6P12956 609 aaKnown RBP eCLIP21.18■□□□□ 0.98
PTN-201ENST00000348225 TXLNAP40222 546 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 KRBA2Q6ZNG9 492 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 AFG3L2Q9Y4W6 797 aa21.18■□□□□ 0.98
PTN-201ENST00000348225 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
PTN-201ENST00000348225 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
PTN-201ENST00000348225 POLR2DO15514 142 aaKnown RBP21.17■□□□□ 0.98
PTN-201ENST00000348225 HMGCS2P54868 508 aa21.17■□□□□ 0.98
PTN-201ENST00000348225 DGKZQ13574 1117 aa21.17■□□□□ 0.98
PTN-201ENST00000348225 KANK3Q6NY19 840 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms