RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
CLCN3-201ENST00000347613 PROM2Q8N271 834 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 PNMA5Q96PV4 448 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 TTYH3Q9C0H2 523 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 MYH10P35580 1976 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
CLCN3-201ENST00000347613 RIMBP2O15034 1052 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 SEMA3EO15041 775 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 ZNF185O15231 689 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 POLR3GO15318 223 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-201ENST00000347613 STAT6P42226 847 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 UBXN1Q04323 297 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 RC3H1Q5TC82 1133 aaKnown RBP6.81□□□□□ -1.32
CLCN3-201ENST00000347613 KANK3Q6NY19 840 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 KRT26Q7Z3Y9 468 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 POLD4Q9HCU8 107 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 BLOC1S4Q9NUP1 217 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 PDS5AQ29RF7 1337 aaKnown RBP6.81□□□□□ -1.32
CLCN3-201ENST00000347613 POTEMA6NI47 508 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 EFCAB8A8MWE9 144 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 AKR1B1P15121 316 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 SLC16A2P36021 539 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 CACNB3P54284 484 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 AMPD2Q01433 879 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 CYP27A1Q02318 531 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 PICALMQ13492 652 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 UBE2SQ16763 222 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 TBCKQ8TEA7 893 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 UBXN4Q92575 508 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 EYA3Q99504 573 aa6.81□□□□□ -1.32
CLCN3-201ENST00000347613 ANKRD31Q8N7Z5 1873 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SIPA1L1O43166 1804 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SMCO2A6NFE2 343 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ERICH4A6NGS2 130 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 UFL1O94874 794 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 XBP1P17861 261 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 KRT9P35527 623 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 PPP4CP60510 307 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SNAP25P60880 206 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 GRB10Q13322 594 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 LRRC41Q15345 812 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 DNAAF5Q86Y56 855 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 KRT222Q8N1A0 295 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 MB21D1Q8N884 522 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ANKRD2Q9GZV1 360 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ZMYND12Q9H0C1 365 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SLC39A2Q9NP94 309 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SALL4Q9UJQ4 1053 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 DNAH12Q6ZR08 3092 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 GPR75-ASB3A0A0A6YYF3 556 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 MYMKA6NI61 221 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 PDE2AO00408 941 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ZSCAN12O43309 604 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ZMYND10O75800 440 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 ATP1A1P05023 1023 aaKnown RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 POLD1P28340 1107 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 RFC4P35249 363 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 JAG1P78504 1218 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 NFIAQ12857 509 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 TBC1D16Q8TBP0 767 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 TRIM9Q9C026 710 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SMARCAL1Q9NZC9 954 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 KIF2AO00139 706 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 CCDC175P0C221 793 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 RHOXF2BP0C7M4 288 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 LONP1P36776 959 aaKnown RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 TXKP42681 527 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 SCNN1DP51172 638 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 VSNL1P62760 191 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 TRAPPC3LQ5T215 181 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 NUP88Q99567 741 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 RHOXF2Q9BQY4 288 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 NYXQ9GZU5 481 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 DNAJC18Q9H819 358 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 EHD2Q9NZN4 543 aa6.8□□□□□ -1.32
CLCN3-201ENST00000347613 HOOK1Q9UJC3 728 aaKnown RBP6.8□□□□□ -1.32
CLCN3-201ENST00000347613 BRCA2P51587 3418 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MYO1BO43795 1136 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 RHOBTB3O94955 611 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MYBL2P10244 700 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 PDHBP11177 359 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 PCP11498 1178 aaKnown RBP6.79□□□□□ -1.32
CLCN3-201ENST00000347613 IL1R1P14778 569 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 CACNB1Q02641 598 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MCM6Q14566 821 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 CRY2Q49AN0 593 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MFSD14BQ5SR56 506 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 ARL6IP4Q66PJ3 421 aaKnown RBP6.79□□□□□ -1.32
CLCN3-201ENST00000347613 ZNF444Q8N0Y2 327 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms