RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 LCA5LO95447 670 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 HNRNPH3P31942 346 aaKnown RBP17.41■□□□□ 0.38
LRP8-202ENST00000347547 PAFAH1B1P43034 410 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 ITGB3BPQ13352 177 aaPredicted RBP17.41■□□□□ 0.38
LRP8-202ENST00000347547 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
LRP8-202ENST00000347547 CCDC121Q6ZUS5 278 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 SGSM3Q96HU1 749 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 EXOC1Q9NV70 894 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 AKAP11Q9UKA4 1901 aa17.41■□□□□ 0.38
LRP8-202ENST00000347547 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 KIF3CO14782 793 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 ZNF263O14978 683 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 IFFO1Q0D2I5 559 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 CCDC181Q5TID7 509 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 CYB5D1Q6P9G0 228 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 FUKQ8N0W3 1084 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 ARFGAP2Q8N6H7 521 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 ALS2CR12Q96Q35 445 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 ATP6V0A4Q9HBG4 840 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 TACC3Q9Y6A5 838 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 TRIM21P19474 475 aaKnown RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 TLDC1Q6P9B6 456 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 FMNL3Q8IVF7 1028 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 P3H4Q92791 437 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 FAM212AQ96EL1 285 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 CCDC114Q96M63 670 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 EPB41L4AQ9HCS5 686 aaPredicted RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 PIH1D3Q9NQM4 214 aaKnown RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 MYH13Q9UKX3 1938 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 RIC1Q4ADV7 1423 aa17.4■□□□□ 0.38
LRP8-202ENST00000347547 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
LRP8-202ENST00000347547 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.38
LRP8-202ENST00000347547 PDE6AP16499 860 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 SLC8A1P32418 973 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 SEC24CP53992 1094 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 CYP27A1Q02318 531 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 KCNB1Q14721 858 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 CCDC96Q2M329 555 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 LACTB2Q53H82 288 aaPredicted RBP17.39■□□□□ 0.38
LRP8-202ENST00000347547 TTC38Q5R3I4 469 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 FAM228AQ86W67 206 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 WHAMMQ8TF30 809 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 TSKSQ9UJT2 592 aa17.39■□□□□ 0.38
LRP8-202ENST00000347547 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 CYP27B1O15528 508 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
LRP8-202ENST00000347547 NFRKBQ6P4R8 1299 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 IFNL3Q8IZI9 196 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 ZNF654Q8IZM8 581 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.39■□□□□ 0.37
LRP8-202ENST00000347547 CCDC42Q96M95 316 aa17.39■□□□□ 0.37
LRP8-202ENST00000347547 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 WNT7AO00755 349 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 RTN2O75298 545 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 PKN1Q16512 942 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 LRIG3Q6UXM1 1119 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 IFIH1Q9BYX4 1025 aaKnown RBP17.38■□□□□ 0.37
LRP8-202ENST00000347547 NAPBQ9H115 298 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 RBM12Q9NTZ6 932 aaKnown RBP17.38■□□□□ 0.37
LRP8-202ENST00000347547 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 TRIM49BA6NDI0 452 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 B4DLN1 442 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 CALRP27797 417 aaKnown RBP17.38■□□□□ 0.37
LRP8-202ENST00000347547 PTGDRQ13258 359 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 XRCC4Q13426 336 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 TTI2Q6NXR4 508 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 EIF1ADQ8N9N8 165 aaKnown RBP17.38■□□□□ 0.37
LRP8-202ENST00000347547 ERGIC2Q96RQ1 377 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 CHD4Q14839 1912 aa17.38■□□□□ 0.37
LRP8-202ENST00000347547 ERICH2A1L162 156 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 C5orf60A6NFR6 353 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 E7EVH7 732 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 PJA2O43164 708 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRP8-202ENST00000347547 TRAPPC10P48553 1259 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 CARSP49589 748 aaKnown RBP17.37■□□□□ 0.37
LRP8-202ENST00000347547 PMS1P54277 932 aaKnown RBP17.37■□□□□ 0.37
LRP8-202ENST00000347547 ZNF174Q15697 407 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 ANKRD20A8PQ5CZ79 823 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
LRP8-202ENST00000347547 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
LRP8-202ENST00000347547 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms