RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FSIP1Q8NA03 581 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 CUL5Q93034 780 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 HPSEQ9Y251 543 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 TOMM70O94826 608 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 VCAM1P19320 739 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
ECM1-201ENST00000346569 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 PTGDRQ13258 359 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 VGLL4Q14135 290 aa12.53□□□□□ -0.4
ECM1-201ENST00000346569 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
ECM1-201ENST00000346569 DOCK1Q14185 1865 aa12.52□□□□□ -0.4
ECM1-201ENST00000346569 ZNF536O15090 1300 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 FDX1P10109 184 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 MCM7P33993 719 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 NDUFA8P51970 172 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 UBE2SQ16763 222 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.41
ECM1-201ENST00000346569 MCTP2Q6DN12 878 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 NEK8Q86SG6 692 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
ECM1-201ENST00000346569 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
ECM1-201ENST00000346569 SLF1Q9BQI6 1058 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
ECM1-201ENST00000346569 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.41
ECM1-201ENST00000346569 SYCE3A1L190 88 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 ZNF202O95125 648 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 NF2P35240 595 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 HMGCS2P54868 508 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 PPATQ06203 517 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
ECM1-201ENST00000346569 IL17AQ16552 155 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 PHIPQ8WWQ0 1821 aa12.51□□□□□ -0.41
ECM1-201ENST00000346569 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 LAD1O00515 517 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 CXCL11O14625 94 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 FOSP01100 380 aaPredicted RBP12.5□□□□□ -0.41
ECM1-201ENST00000346569 ICAM1P05362 532 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 PFKFB1P16118 471 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 DSG3P32926 999 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 PRPHP41219 470 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 USH1GQ495M9 461 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 PPP4R3AQ6IN85 833 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 TIGD1Q96MW7 591 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 FUCA2Q9BTY2 467 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
ECM1-201ENST00000346569 CSADQ9Y600 493 aa12.5□□□□□ -0.41
ECM1-201ENST00000346569 ABCB11O95342 1321 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 CYP3A7-CYP3A51PA0A087WV96 503 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 FLOT1O75955 427 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 TAL1P17542 331 aaPredicted RBP12.49□□□□□ -0.41
ECM1-201ENST00000346569 CYP3A7P24462 503 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 USP11P51784 963 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 COG2Q14746 738 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 SPECC1Q5M775 1068 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
ECM1-201ENST00000346569 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 ARMC9Q7Z3E5 817 aa12.49□□□□□ -0.41
ECM1-201ENST00000346569 ELOA2Q8IYF1 753 aaPredicted RBP12.49□□□□□ -0.41
ECM1-201ENST00000346569 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms