RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 HS1BP3Q53T59 392 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 GNA14O95837 355 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 SPP2Q13103 211 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 GSDMAQ96QA5 445 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 NRBP2Q9NSY0 501 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 CETN2P41208 172 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 ANTXR2P58335 489 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 HERC4Q5GLZ8 1057 aaPredicted RBP15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 GPC2Q8N158 579 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 SAMD3Q8N6K7 520 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 TCHPQ9BT92 498 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 DEFB129Q9H1M3 183 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 SLC26A4O43511 780 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 GADD45BO75293 160 aaPredicted RBP15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 LIG1P18858 919 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 CDC27P30260 824 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 TECP42680 631 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 GIMAP8Q8ND71 665 aaPredicted RBP15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
CSNK1G3-201ENST00000345990 ESPNB1AK53 854 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 STRN3Q13033 797 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 FAM20AQ96MK3 541 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 INCENPQ9NQS7 918 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 COL4A3BPQ9Y5P4 624 aa15.27■□□□□ 0.04
CSNK1G3-201ENST00000345990 PKP1Q13835 747 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 MB21D1Q8N884 522 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 PLIN2Q99541 437 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 COL18A1P39060 1754 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 USP11P51784 963 aa15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 TRMT1LQ7Z2T5 733 aaKnown RBP15.27■□□□□ 0.03
CSNK1G3-201ENST00000345990 NMT2O60551 498 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 EHBP1Q8NDI1 1231 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 RIC8AQ9NPQ8 531 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 LARSQ9P2J5 1176 aaKnown RBP15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 ESYT2A0FGR8 921 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 EVCP57679 992 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 ZFYVE27Q5T4F4 411 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 NEK9Q8TD19 979 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 ZNF577Q9BSK1 485 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 CYLC1P35663 651 aaPredicted RBP15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 NR5A1Q13285 461 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 QRICH1Q2TAL8 776 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 VTI1AQ96AJ9 217 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 PRMT6Q96LA8 375 aaPredicted RBP15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 AGXT2Q9BYV1 514 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 GAP43P17677 238 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 SP4Q02446 784 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 DPP9Q86TI2 863 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 TPH2Q8IWU9 490 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 MXD3Q9BW11 206 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 SYNRGQ9UMZ2 1314 aa15.26■□□□□ 0.03
CSNK1G3-201ENST00000345990 AFDNP55196 1824 aaKnown RBP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 TRAF5O00463 557 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 KIF4AO95239 1232 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 SLFN14P0C7P3 912 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 IFI16Q16666 785 aaKnown RBP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 C9orf131Q5VYM1 1079 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 ANKRD13AQ8IZ07 590 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 KLRG2A4D1S0 409 aaPredicted RBP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 KIF5CO60282 957 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 STX10O60499 249 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 COG2Q14746 738 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 TDRD12Q587J7 1177 aaKnown RBP15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 NDUFB10O96000 172 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 PTPREP23469 700 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 TAF4BQ92750 862 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
CSNK1G3-201ENST00000345990 NUP58Q9BVL2 599 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 FAM196BA6NMK8 535 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 GPBP1Q86WP2 473 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 SCYL3Q8IZE3 742 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 ANKS1AQ92625 1134 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 CSRNP2Q9H175 543 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 IL25Q9H293 177 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 PHACTR2O75167 634 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 SPECC1Q5M775 1068 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms