RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 SCYL3Q8IZE3 742 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 METTL14Q9HCE5 456 aaKnown RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 COPRSQ9NQ92 184 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 MYOM2P54296 1465 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 POLE2P56282 527 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 LRRC23Q53EV4 343 aaPredicted RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 ARHGEF18Q6ZSZ5 1173 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 ARHGEF25Q86VW2 580 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 PPP4R1Q8TF05 950 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 P2RX5Q93086 422 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 MAGOHBQ96A72 148 aaKnown RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 MROH5Q6ZUA9 1318 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 HIBADHP31937 336 aaKnown RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 PGBD1Q96JS3 809 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 GGCXP38435 758 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 SNX16P57768 344 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 ADAM9Q13443 819 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 SAAL1Q96ER3 474 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 THEGQ9P2T0 379 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 DBNLQ9UJU6 430 aaKnown RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 TRAPPC10P48553 1259 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 PLTPP55058 493 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 GALNT17Q6IS24 598 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 PBKQ96KB5 322 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 STK10O94804 968 aaKnown RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 PDE6AP16499 860 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 FAM26FQ5R3K3 315 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 KIF1CO43896 1103 aaKnown RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 FAM47AQ5JRC9 791 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 TBC1D1Q86TI0 1168 aaPredicted RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 CCT6BQ92526 530 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 PKD2L1Q9P0L9 805 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 TPTE2Q6XPS3 522 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 MIER3Q7Z3K6 550 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 TSC22D3Q99576 134 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 BIN2Q9UBW5 565 aaPredicted RBP19.1■□□□□ 0.65
SPAST-202ENST00000345662 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
SPAST-202ENST00000345662 ZWINTO95229 277 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 MAN2A1Q16706 1144 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 TSPYL2Q9H2G4 693 aaPredicted RBP19.09■□□□□ 0.65
SPAST-202ENST00000345662 NFU1Q9UMS0 254 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 FAM170AA1A519 330 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 BACH1O14867 736 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 EXOC3L4Q17RC7 722 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 GLE1Q53GS7 698 aaKnown RBP19.09■□□□□ 0.65
SPAST-202ENST00000345662 NEK8Q86SG6 692 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 FTCDO95954 541 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 SERPINB6P35237 376 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 EIF6P56537 245 aaKnown RBP19.09■□□□□ 0.65
SPAST-202ENST00000345662 NEK9Q8TD19 979 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 RSAD2Q8WXG1 361 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 KCNF1Q9H3M0 494 aa19.09■□□□□ 0.65
SPAST-202ENST00000345662 CRCPO75575 148 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 CUL1Q13616 776 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 CAPN12Q6ZSI9 719 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 PCDHA13Q9Y5I0 950 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 CYP27A1Q02318 531 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 CASC4Q6P4E1 433 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 RDH13Q8NBN7 331 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 RNF26Q9BY78 433 aaPredicted RBP19.08■□□□□ 0.65
SPAST-202ENST00000345662 RAB20Q9NX57 234 aa19.08■□□□□ 0.65
SPAST-202ENST00000345662 HARSP12081 509 aaKnown RBP19.08■□□□□ 0.64
SPAST-202ENST00000345662 EIF4A3P38919 411 aaKnown RBP19.08■□□□□ 0.64
SPAST-202ENST00000345662 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.08■□□□□ 0.64
SPAST-202ENST00000345662 SEMA3EO15041 775 aa19.08■□□□□ 0.64
SPAST-202ENST00000345662 DDAH1O94760 285 aa19.08■□□□□ 0.64
SPAST-202ENST00000345662 CYP2E1P05181 493 aaPredicted RBP19.08■□□□□ 0.64
SPAST-202ENST00000345662 MAN1A1P33908 653 aa19.08■□□□□ 0.64
SPAST-202ENST00000345662 PARP10Q53GL7 1025 aa19.08■□□□□ 0.64
SPAST-202ENST00000345662 PDCD7Q8N8D1 485 aaKnown RBP19.08■□□□□ 0.64
SPAST-202ENST00000345662 EPC1Q9H2F5 836 aa19.08■□□□□ 0.64
SPAST-202ENST00000345662 ZBTB22O15209 634 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 LMNB1P20700 586 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 THAP9Q9H5L6 903 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 MRFAP1Q9Y605 127 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 A1BGP04217 495 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 MAEAQ7L5Y9 396 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 ZNF496Q96IT1 587 aaPredicted RBP19.07■□□□□ 0.64
SPAST-202ENST00000345662 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
SPAST-202ENST00000345662 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 PPFIA2O75334 1257 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 TADA3O75528 432 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 MYL1P05976 194 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 CADPS2Q86UW7 1296 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 KSR1Q8IVT5 923 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 SRPRBQ9Y5M8 271 aaKnown RBP19.07■□□□□ 0.64
SPAST-202ENST00000345662 MMP1P03956 469 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 CYP2J2P51589 502 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 SEPT2Q15019 361 aa19.07■□□□□ 0.64
SPAST-202ENST00000345662 SLC24A3Q9HC58 644 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms