RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 POLD4Q9HCU8 107 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 DISC1Q9NRI5 854 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 MYH13Q9UKX3 1938 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 ANKRD36CQ5JPF3 1778 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 MAGEB6P1A0A0J9YX57 407 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 ANO9A1A5B4 782 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 ANKRD18AQ8IVF6 992 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 CSGALNACT2Q8N6G5 542 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 PYM1Q9BRP8 204 aaKnown RBP19.85■□□□□ 0.77
VHL-202ENST00000345392 THAP9Q9H5L6 903 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 GRIN2DO15399 1336 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
VHL-202ENST00000345392 FBXW10Q5XX13 1052 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 CCDC70Q6NSX1 233 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 MMS22LQ6ZRQ5 1243 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 ZNF662Q6ZS27 426 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 TSEN2Q8NCE0 465 aaKnown RBP19.84■□□□□ 0.77
VHL-202ENST00000345392 ARL8AQ96BM9 186 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 SNX12Q9UMY4 172 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 NIP7Q9Y221 180 aaKnown RBP eCLIP19.84■□□□□ 0.77
VHL-202ENST00000345392 ERVV-1B6SEH8 477 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 PSMA7O14818 248 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 KLRC4O43908 158 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 SCG2P13521 617 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
VHL-202ENST00000345392 TTI2Q6NXR4 508 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 C4orf32Q8N8J7 132 aa19.84■□□□□ 0.77
VHL-202ENST00000345392 PURBQ96QR8 312 aaKnown RBP19.84■□□□□ 0.77
VHL-202ENST00000345392 DUSP9Q99956 384 aaKnown RBP19.84■□□□□ 0.77
VHL-202ENST00000345392 EIF3HO15372 352 aaKnown RBP eCLIP19.83■□□□□ 0.77
VHL-202ENST00000345392 MOCS3O95396 460 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 LONP1P36776 959 aaKnown RBP19.83■□□□□ 0.77
VHL-202ENST00000345392 IQCEQ6IPM2 695 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 NFRKBQ6P4R8 1299 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 AMOTL1Q8IY63 956 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 SPATA4Q8NEY3 305 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 CCDC42Q96M95 316 aa19.83■□□□□ 0.77
VHL-202ENST00000345392 CRKLP46109 303 aaKnown RBP19.83■□□□□ 0.76
VHL-202ENST00000345392 VAV2P52735 878 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 ZBED6P86452 979 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 FAM47AQ5JRC9 791 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 INTS5Q6P9B9 1019 aaKnown RBP19.83■□□□□ 0.76
VHL-202ENST00000345392 C3orf67Q6ZVT6 689 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 CCDC170Q8IYT3 715 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 ANAPC4Q9UJX5 808 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 FAM205AQ6ZU69 1335 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 DISP2A7MBM2 1401 aa19.83■□□□□ 0.76
VHL-202ENST00000345392 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 YY1AP1Q9H869 796 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 JAG2Q9Y219 1238 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 TRAPPC10P48553 1259 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 TTMPQ5BVD1 217 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 KCTD16Q68DU8 428 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 MMGT1Q8N4V1 131 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 LRRC15Q8TF66 581 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 GPKOWQ92917 476 aaPredicted RBP eCLIP19.82■□□□□ 0.76
VHL-202ENST00000345392 FAM107BQ9H098 131 aa19.82■□□□□ 0.76
VHL-202ENST00000345392 SHTN1A0MZ66 631 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 MTIF2P46199 727 aaKnown RBP19.81■□□□□ 0.76
VHL-202ENST00000345392 KCNQ4P56696 695 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 SPA17Q15506 151 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 CCDC152Q4G0S7 254 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 ANKRD40Q6AI12 368 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 SH2D3CQ8N5H7 860 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 CNOT6LQ96LI5 555 aaKnown RBP19.81■□□□□ 0.76
VHL-202ENST00000345392 TMEM60Q9H2L4 133 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 MYH10P35580 1976 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 BAZ2AQ9UIF9 1905 aaKnown RBP19.81■□□□□ 0.76
VHL-202ENST00000345392 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 PDCLQ13371 301 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 GIMAP8Q8ND71 665 aaPredicted RBP19.81■□□□□ 0.76
VHL-202ENST00000345392 NOC4LQ9BVI4 516 aaKnown RBP19.81■□□□□ 0.76
VHL-202ENST00000345392 LRP5O75197 1615 aa19.81■□□□□ 0.76
VHL-202ENST00000345392 NCK2O43639 380 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 CALM1P0DP23 149 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 CALM2P0DP24 149 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 CALM3P0DP25 149 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 ATP1A2P50993 1020 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 ARL6IP4Q66PJ3 421 aaKnown RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 DTHD1Q6ZMT9 781 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 SUGP1Q8IWZ8 645 aaKnown RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 ANKRD13CQ8N6S4 541 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 SH3GL2Q99962 352 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 NUP58Q9BVL2 599 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 IFIH1Q9BYX4 1025 aaKnown RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 TAF1P21675 1872 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 GOLGA8KD6RF30 607 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 TRIM58Q8NG06 486 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 OSBPL9Q96SU4 736 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 RIOK1Q9BRS2 568 aaKnown RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 BCORQ6W2J9 1755 aa19.8■□□□□ 0.76
VHL-202ENST00000345392 COL1A1P02452 1464 aaPredicted RBP19.8■□□□□ 0.76
VHL-202ENST00000345392 LOC102724159A0A0B4J2E5 919 aa19.79■□□□□ 0.76
VHL-202ENST00000345392 TACC1O75410 805 aa19.79■□□□□ 0.76
VHL-202ENST00000345392 RHOBTB3O94955 611 aa19.79■□□□□ 0.76
VHL-202ENST00000345392 UBA7P41226 1012 aa19.79■□□□□ 0.76
VHL-202ENST00000345392 PWP2Q15269 919 aaKnown RBP19.79■□□□□ 0.76
VHL-202ENST00000345392 PFKFB3Q16875 520 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms