RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PGK2P07205 417 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 SMARCA1P28370 1054 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 RBM25P49756 843 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 PPP2R5BQ15173 497 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 SLC35G1Q2M3R5 365 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 TMTC3Q6ZXV5 915 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 AMNQ9BXJ7 453 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 ZNFX1Q9P2E3 1918 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 HTTP42858 3142 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 SMCHD1A6NHR9 2005 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 XRCC5P13010 732 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 ANKRD1Q15327 319 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 NSMFQ6X4W1 530 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 PXYLP1Q8TE99 480 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 MTMR8Q96EF0 704 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 PNMA6FA0A0J9YX94 578 aa24.12■■□□□ 1.45
SMARCB1-202ENST00000344921 COBLO75128 1261 aa24.12■■□□□ 1.45
SMARCB1-202ENST00000344921 PDIA3P30101 505 aaKnown RBP24.12■■□□□ 1.45
SMARCB1-202ENST00000344921 AK2P54819 239 aa24.12■■□□□ 1.45
SMARCB1-202ENST00000344921 ABCB11O95342 1321 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 CDC27P30260 824 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 ADD1P35611 737 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 EVCP57679 992 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 CCT2P78371 535 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 STK3Q13188 491 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 NOL8Q76FK4 1167 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 NPLOC4Q8TAT6 608 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 ABHD8Q96I13 439 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 ALDH8A1Q9H2A2 487 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 PCDHA1Q9Y5I3 950 aa24.11■■□□□ 1.45
SMARCB1-202ENST00000344921 NFIBO00712 420 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 MYCP01106 439 aaPredicted RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 TRAF1Q13077 416 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 CCL14Q16627 93 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 TRMT44Q8IYL2 757 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 ZNF274Q96GC6 653 aaPredicted RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 A1CFQ9NQ94 594 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 MRPL11Q9Y3B7 192 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 PFASO15067 1338 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 PTPDC1A2A3K4 754 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 HOXC6P09630 235 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 TRIB2Q92519 343 aa24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 FAM217BQ9NTX9 383 aaPredicted RBP24.1■■□□□ 1.45
SMARCB1-202ENST00000344921 ZNF236Q9UL36 1845 aa24.09■■□□□ 1.45
SMARCB1-202ENST00000344921 hCG_1642624A0A1W2PR95 340 aa24.09■■□□□ 1.45
SMARCB1-202ENST00000344921 UBXN2AP68543 259 aa24.09■■□□□ 1.45
SMARCB1-202ENST00000344921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.09■■□□□ 1.45
SMARCB1-202ENST00000344921 POTEB2H3BUK9 544 aa24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 PPP1R11O60927 126 aaPredicted RBP24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 HMGCRP04035 888 aa24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 CLEC4DQ8WXI8 215 aa24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 KIF2CQ99661 725 aa24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 NCOA5Q9HCD5 579 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-202ENST00000344921 RNF207Q6ZRF8 634 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 TBC1D32Q96NH3 1257 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 CYP39A1Q9NYL5 469 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 TPCN1Q9ULQ1 816 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 CNTNAP5Q8WYK1 1306 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 INHAP05111 366 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 CALML3P27482 149 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 BAATQ14032 418 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 ZNF792Q3KQV3 632 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 MCF2L2Q86YR7 1114 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 MAML3Q96JK9 1138 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 SLKQ9H2G2 1235 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 FLRT1Q9NZU1 646 aa24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 DIS3Q9Y2L1 958 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 V9GY48 417 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-202ENST00000344921 NID2Q14112 1375 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 PLXNA1Q9UIW2 1896 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 DNAJC25-GNG10A0A024R161 153 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 CPLX1O14810 134 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 MFSD14CQ5VZR4 134 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 ARMC5Q96C12 935 aa24.06■■□□□ 1.44
SMARCB1-202ENST00000344921 CCDC85CA6NKD9 419 aa24.05■■□□□ 1.44
SMARCB1-202ENST00000344921 CNTN2Q02246 1040 aa24.05■■□□□ 1.44
SMARCB1-202ENST00000344921 ZNF333Q96JL9 665 aa24.05■■□□□ 1.44
SMARCB1-202ENST00000344921 CFBP00751 764 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 RPS6P62753 249 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 AKAP17AQ02040 695 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 FUT2Q10981 343 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 TRIM32Q13049 653 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 RABEP1Q15276 862 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 OLFML2BQ68BL8 750 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 CYP2C19P33261 490 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 CPLX2Q6PUV4 134 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 SLC30A10Q6XR72 485 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 HEATR3Q7Z4Q2 680 aa24.04■■□□□ 1.44
SMARCB1-202ENST00000344921 PPFIA3O75145 1194 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 PRKAR2AP13861 404 aaKnown RBP24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 MTFR1Q15390 333 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 FAM133AQ8N9E0 248 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 RGS22Q8NE09 1264 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 TBC1D5Q92609 795 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 PHKBQ93100 1093 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 TINF2Q9BSI4 451 aa24.03■■□□□ 1.44
SMARCB1-202ENST00000344921 PURBQ96QR8 312 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-202ENST00000344921 SLC26A6Q9BXS9 759 aa24.02■■□□□ 1.44
SMARCB1-202ENST00000344921 ST18O60284 1047 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 PFKFB2O60825 505 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms