RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 RASGRP4Q8TDF6 673 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 CCDC97Q96F63 343 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 ANO3Q9BYT9 981 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 RGS12O14924 1447 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 PTGS1P23219 599 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 YWHAEP62258 255 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 IFFO1Q0D2I5 559 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 RBM46Q8TBY0 533 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 STAMQ92783 540 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 GNA14O95837 355 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 CCDC175P0C221 793 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 LONP1P36776 959 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 NFX1Q12986 1120 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 TAF3Q5VWG9 929 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 ADALQ6DHV7 355 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 MIS18BP1Q6P0N0 1132 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 CYP2B6P20813 491 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SREBF2Q12772 1141 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 CCDC84Q86UT8 332 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 PABPN1LA6NDY0 278 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 RETREG2Q8NC44 543 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SEPT9Q9UHD8 586 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 RFX7Q2KHR2 1363 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 ADGRB1O14514 1584 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 PRPF6O94906 941 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SCRN1Q12765 414 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SMC1AQ14683 1233 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 SLC7A3Q8WY07 619 aa18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 ZNF215Q9UL58 517 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-201ENST00000344626 BTBD18B2RXH4 712 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 IFNKQ9P0W0 207 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 SKILP12757 684 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 DDR1Q08345 913 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 RPAP3Q9H6T3 665 aaPredicted RBP18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 HLTFQ14527 1009 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■□□□□ 10.1
SMARCA4-201ENST00000344626 PPP2R5AQ15172 486 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 CDC42EP5Q6NZY7 148 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 COL4A3BPQ9Y5P4 624 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 INO80B-WBP1J3KQ70 363 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 CSF1RP07333 972 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 CCDC91Q7Z6B0 441 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 SESTD1Q86VW0 696 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 NUP58Q9BVL2 599 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 INO80BQ9C086 356 aaPredicted RBP18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 TUBB4AP04350 444 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 TNFAIP3P21580 790 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 MARK3P27448 753 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 LIG4P49917 911 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 NLRP12P59046 1061 aa18.18■□□□□ 0.5
SMARCA4-201ENST00000344626 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 TMCO3Q6UWJ1 677 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 NELFCDQ8IXH7 590 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 RPS6KC1Q96S38 1066 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 PPP1R16BQ96T49 567 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 SYT17Q9BSW7 474 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 MAGEF1Q9HAY2 307 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 ERCC3P19447 782 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 RNASELQ05823 741 aaKnown RBP18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 PDIA6Q15084 440 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 LIN9Q5TKA1 542 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 ZNF280CQ8ND82 737 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 RASAL2Q9UJF2 1139 aa18.17■□□□□ 0.5
SMARCA4-201ENST00000344626 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms